110 items (Dechloromonas aromatica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Daro_0007	Response regulator receiver modulated metal dependent phosphohydrolase. (379 aa)
	Daro_0008	PAS protein. (1439 aa)
	Daro_0040	PAS/PAC sensor hybrid histidine kinase. (1193 aa)
	Daro_0106	Stage II sporulation E. (415 aa)
	Daro_0133	Diguanylate cyclase/phosphodiesterase. (694 aa)
	Daro_0223	PAS protein. (1214 aa)
	Daro_0225	PAS/PAC sensor hybrid histidine kinase. (673 aa)
	Daro_0232	Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. (738 aa)
	Daro_0240	Hpt sensor hybrid histidine kinase. (1005 aa)
	Daro_0244	PAS/PAC sensor hybrid histidine kinase. (1066 aa)
	Daro_0347	PAS protein. (513 aa)
	Daro_0411	PAS:GGDEF protein. (317 aa)
	Daro_0420	PAS protein. (787 aa)
	Daro_0424	PAS:GGDEF protein. (715 aa)
	Daro_0460	Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. (835 aa)
	Daro_0470	GGDEF protein. (412 aa)
	Daro_0551	PAS protein. (1026 aa)
	Daro_0709	Response regulator receiver modulated diguanylate cyclase. (322 aa)
	Daro_0733	Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family. (101 aa)
	Daro_0937	Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Hpt. (852 aa)
	Daro_0971	PAS protein. (1187 aa)
	Daro_0972	Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (994 aa)
	Daro_0973	PAS/PAC sensor hybrid histidine kinase. (1064 aa)
	Daro_1009	Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. (655 aa)
	Daro_1156	Diguanylate cyclase with PAS/PAC sensor. (469 aa)
	Daro_1203	Response regulator receiver modulated diguanylate cyclase. (373 aa)
	Daro_1362	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (862 aa)
	Daro_1441	PAS protein. (794 aa)
	Daro_1445	Two component transcriptional regulator, LuxR family. (308 aa)
	Daro_1446	Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. (1131 aa)
	Daro_1487	Helix-turn-helix, Fis-type:Nif-specific regulatory protein. (549 aa)
	Daro_1488	PAS protein. (531 aa)
	Daro_1542	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1006 aa)
	Daro_1572	Two component transcriptional regulator, LuxR family. (218 aa)
	Daro_1573	Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, dimerization and phosphoacceptor region. (373 aa)
	Daro_1574	PAS/PAC sensor hybrid histidine kinase. (841 aa)
	Daro_1579	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1093 aa)
	Daro_1597	Response regulator receiver modulated diguanylate cyclase. (313 aa)
	Daro_1614	PAS/PAC sensor hybrid histidine kinase. (873 aa)
	Daro_1622	PAS protein. (802 aa)
	Daro_1662	Diguanylate cyclase with PAS/PAC sensor. (820 aa)
	Daro_1676	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (996 aa)
	Daro_1729	Metal-dependent phosphohydrolase, HD subdomain. (359 aa)
	Daro_1771	PAS:GGDEF protein. (449 aa)
	Daro_1772	PAS/PAC sensor hybrid histidine kinase. (1169 aa)
	Daro_1822	Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. (582 aa)
	Daro_1827	Helix-turn-helix, Fis-type. (465 aa)
	Daro_1828	ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal. (674 aa)
	Daro_1896	PAS/PAC sensor hybrid histidine kinase. (865 aa)
	Daro_1909	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (832 aa)
	Daro_1934	PAS/PAC sensor hybrid histidine kinase. (1015 aa)
	Daro_1976	PAS:GGDEF protein. (963 aa)
	Daro_1990	Sensor histidine kinase. (132 aa)
	Daro_1993	CHASE2:Stage II sporulation E. (708 aa)
	Daro_1995	Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. (115 aa)
	Daro_2048	Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (827 aa)
	Daro_2105	PAS protein. (680 aa)
	Daro_2127	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (543 aa)
	Daro_2195	Type IV pilus assembly PilZ. (120 aa)
	Daro_2220	GGDEF protein. (226 aa)
	Daro_2378	PAS protein. (901 aa)
	Daro_2754	PAS/PAC sensor hybrid histidine kinase. (1275 aa)
	Daro_2787	Hpt sensor hybrid histidine kinase. (909 aa)
	Daro_2788	Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. (715 aa)
	Daro_2798	Response regulator receiver. (306 aa)
	Daro_2811	PAS protein. (1023 aa)
	Daro_2825	PAS:GGDEF protein. (548 aa)
	Daro_2847	PAS protein. (764 aa)
	Daro_2880	GGDEF protein. (410 aa)
	Daro_2881	Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-. (367 aa)
	Daro_2890	Peptidase M52, hydrogen uptake protein. (1053 aa)
	Daro_2891	Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. (858 aa)
	Daro_2901	Hpt. (112 aa)
	Daro_2934	PAS protein. (955 aa)
	Daro_2946	Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal. (777 aa)
	Daro_3006	PAS protein. (1560 aa)
	Daro_3048	Diguanylate cyclase. (346 aa)
	Daro_3052	GGDEF protein. (523 aa)
	Daro_3099	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1038 aa)
	Daro_3284	PAS/PAC sensor signal transduction histidine kinase. (856 aa)
	Daro_3285	Response regulator receiver modulated metal dependent phosphohydrolase. (362 aa)
	Daro_3290	Metal dependent phosphohydrolase. (202 aa)
	Daro_3350	Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt. (923 aa)
	Daro_3445	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1094 aa)
	Daro_3458	Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain. (365 aa)
	Daro_3459	Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt. (1055 aa)
	Daro_3508	Diguanylate cyclase. (638 aa)
	Daro_3549	PAS/PAC sensor hybrid histidine kinase. (982 aa)
	Daro_3571	Diguanylate cyclase/phosphodiesterase. (611 aa)
	Daro_3623	Diguanylate cyclase with PAS/PAC sensor. (583 aa)
	Daro_3686	Signal transduction histidine kinase. (620 aa)
	Daro_3688	Response regulator receiver modulated diguanylate cyclase. (543 aa)
	Daro_3695	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (930 aa)
	Daro_3714	PAS protein. (1028 aa)
	Daro_3734	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (582 aa)
	Daro_3743	Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (722 aa)
	Daro_3744	Histidine kinase. (718 aa)
	Daro_3750	PAS:GGDEF protein. (721 aa)
	Daro_3754	Diguanylate cyclase/phosphodiesterase. (561 aa)
	Daro_3770	PAS:GGDEF protein. (328 aa)
	Daro_3813	PAS/PAC sensor hybrid histidine kinase. (963 aa)
	Daro_3821	Cache sensor hybrid histidine kinase. (759 aa)
	Daro_3846	PAS/PAC sensor hybrid histidine kinase. (860 aa)
	Daro_3872	PAS protein. (853 aa)
	Daro_3954	PAS:GGDEF:Hemerythrin HHE cation binding region. (667 aa)
	Daro_3990	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1665 aa)
	Daro_4037	Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal. (659 aa)
	Daro_4048	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (739 aa)
	Daro_4086	Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal. (631 aa)
	Daro_4142	PAS/PAC sensor hybrid histidine kinase. (916 aa)

Your Current Organism:

Dechloromonas aromatica

NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Daro_0007	Daro_0008	Response regulator receiver modulated metal dependent phosphohydrolase.	PAS protein.	0.916
Daro_0007	Daro_0040	Response regulator receiver modulated metal dependent phosphohydrolase.	PAS/PAC sensor hybrid histidine kinase.	0.653
Daro_0007	Daro_0106	Response regulator receiver modulated metal dependent phosphohydrolase.	Stage II sporulation E.	0.478
Daro_0007	Daro_0223	Response regulator receiver modulated metal dependent phosphohydrolase.	PAS protein.	0.615
Daro_0007	Daro_0240	Response regulator receiver modulated metal dependent phosphohydrolase.	Hpt sensor hybrid histidine kinase.	0.549
Daro_0007	Daro_0244	Response regulator receiver modulated metal dependent phosphohydrolase.	PAS/PAC sensor hybrid histidine kinase.	0.492
Daro_0007	Daro_0411	Response regulator receiver modulated metal dependent phosphohydrolase.	PAS:GGDEF protein.	0.720
Daro_0007	Daro_0470	Response regulator receiver modulated metal dependent phosphohydrolase.	GGDEF protein.	0.722
Daro_0007	Daro_0551	Response regulator receiver modulated metal dependent phosphohydrolase.	PAS protein.	0.460
Daro_0007	Daro_0709	Response regulator receiver modulated metal dependent phosphohydrolase.	Response regulator receiver modulated diguanylate cyclase.	0.713
Daro_0007	Daro_0937	Response regulator receiver modulated metal dependent phosphohydrolase.	Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Hpt.	0.460
Daro_0007	Daro_0973	Response regulator receiver modulated metal dependent phosphohydrolase.	PAS/PAC sensor hybrid histidine kinase.	0.405
Daro_0007	Daro_1156	Response regulator receiver modulated metal dependent phosphohydrolase.	Diguanylate cyclase with PAS/PAC sensor.	0.558
Daro_0007	Daro_1597	Response regulator receiver modulated metal dependent phosphohydrolase.	Response regulator receiver modulated diguanylate cyclase.	0.638
Daro_0007	Daro_1896	Response regulator receiver modulated metal dependent phosphohydrolase.	PAS/PAC sensor hybrid histidine kinase.	0.403
Daro_0007	Daro_1976	Response regulator receiver modulated metal dependent phosphohydrolase.	PAS:GGDEF protein.	0.405
Daro_0007	Daro_2127	Response regulator receiver modulated metal dependent phosphohydrolase.	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).	0.405
Daro_0007	Daro_2378	Response regulator receiver modulated metal dependent phosphohydrolase.	PAS protein.	0.496
Daro_0007	Daro_2754	Response regulator receiver modulated metal dependent phosphohydrolase.	PAS/PAC sensor hybrid histidine kinase.	0.502
Daro_0007	Daro_2787	Response regulator receiver modulated metal dependent phosphohydrolase.	Hpt sensor hybrid histidine kinase.	0.459