STRINGSTRING
Daro_0008 Daro_0008 Daro_0040 Daro_0040 Daro_0133 Daro_0133 Daro_0223 Daro_0223 Daro_0225 Daro_0225 Daro_0232 Daro_0232 Daro_0240 Daro_0240 Daro_0244 Daro_0244 Daro_0347 Daro_0347 Daro_0411 Daro_0411 Daro_0420 Daro_0420 Daro_0424 Daro_0424 Daro_0460 Daro_0460 Daro_0551 Daro_0551 Daro_0937 Daro_0937 Daro_0971 Daro_0971 Daro_0972 Daro_0972 Daro_0973 Daro_0973 Daro_1009 Daro_1009 Daro_1156 Daro_1156 Daro_1441 Daro_1441 Daro_1445 Daro_1445 Daro_1446 Daro_1446 Daro_1542 Daro_1542 Daro_1572 Daro_1572 Daro_1573 Daro_1573 Daro_1574 Daro_1574 Daro_1579 Daro_1579 Daro_1614 Daro_1614 Daro_1622 Daro_1622 Daro_1662 Daro_1662 Daro_1771 Daro_1771 Daro_1772 Daro_1772 Daro_1822 Daro_1822 Daro_1896 Daro_1896 Daro_1934 Daro_1934 Daro_1976 Daro_1976 Daro_2048 Daro_2048 Daro_2105 Daro_2105 Daro_2127 Daro_2127 Daro_2195 Daro_2195 Daro_2378 Daro_2378 Daro_2754 Daro_2754 Daro_2787 Daro_2787 Daro_2788 Daro_2788 Daro_2798 Daro_2798 Daro_2811 Daro_2811 Daro_2825 Daro_2825 Daro_2847 Daro_2847 Daro_2881 Daro_2881 Daro_2890 Daro_2890 Daro_2891 Daro_2891 Daro_2901 Daro_2901 Daro_2934 Daro_2934 Daro_2946 Daro_2946 Daro_3006 Daro_3006 Daro_3052 Daro_3052 Daro_3099 Daro_3099 Daro_3284 Daro_3284 Daro_3350 Daro_3350 Daro_3445 Daro_3445 Daro_3459 Daro_3459 Daro_3508 Daro_3508 Daro_3549 Daro_3549 Daro_3571 Daro_3571 Daro_3623 Daro_3623 Daro_3686 Daro_3686 Daro_3688 Daro_3688 Daro_3714 Daro_3714 Daro_3743 Daro_3743 Daro_3744 Daro_3744 Daro_3750 Daro_3750 Daro_3754 Daro_3754 Daro_3813 Daro_3813 Daro_3821 Daro_3821 Daro_3846 Daro_3846 Daro_3872 Daro_3872 Daro_3954 Daro_3954 Daro_3990 Daro_3990 Daro_4037 Daro_4037 Daro_4048 Daro_4048 Daro_4086 Daro_4086 Daro_4142 Daro_4142
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_0008PAS protein. (1439 aa)
Daro_0040PAS/PAC sensor hybrid histidine kinase. (1193 aa)
Daro_0133Diguanylate cyclase/phosphodiesterase. (694 aa)
Daro_0223PAS protein. (1214 aa)
Daro_0225PAS/PAC sensor hybrid histidine kinase. (673 aa)
Daro_0232Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. (738 aa)
Daro_0240Hpt sensor hybrid histidine kinase. (1005 aa)
Daro_0244PAS/PAC sensor hybrid histidine kinase. (1066 aa)
Daro_0347PAS protein. (513 aa)
Daro_0411PAS:GGDEF protein. (317 aa)
Daro_0420PAS protein. (787 aa)
Daro_0424PAS:GGDEF protein. (715 aa)
Daro_0460Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. (835 aa)
Daro_0551PAS protein. (1026 aa)
Daro_0937Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Hpt. (852 aa)
Daro_0971PAS protein. (1187 aa)
Daro_0972Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (994 aa)
Daro_0973PAS/PAC sensor hybrid histidine kinase. (1064 aa)
Daro_1009Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. (655 aa)
Daro_1156Diguanylate cyclase with PAS/PAC sensor. (469 aa)
Daro_1441PAS protein. (794 aa)
Daro_1445Two component transcriptional regulator, LuxR family. (308 aa)
Daro_1446Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. (1131 aa)
Daro_1542Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1006 aa)
Daro_1572Two component transcriptional regulator, LuxR family. (218 aa)
Daro_1573Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, dimerization and phosphoacceptor region. (373 aa)
Daro_1574PAS/PAC sensor hybrid histidine kinase. (841 aa)
Daro_1579Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1093 aa)
Daro_1614PAS/PAC sensor hybrid histidine kinase. (873 aa)
Daro_1622PAS protein. (802 aa)
Daro_1662Diguanylate cyclase with PAS/PAC sensor. (820 aa)
Daro_1771PAS:GGDEF protein. (449 aa)
Daro_1772PAS/PAC sensor hybrid histidine kinase. (1169 aa)
Daro_1822Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. (582 aa)
Daro_1896PAS/PAC sensor hybrid histidine kinase. (865 aa)
Daro_1934PAS/PAC sensor hybrid histidine kinase. (1015 aa)
Daro_1976PAS:GGDEF protein. (963 aa)
Daro_2048Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (827 aa)
Daro_2105PAS protein. (680 aa)
Daro_2127Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (543 aa)
Daro_2195Type IV pilus assembly PilZ. (120 aa)
Daro_2378PAS protein. (901 aa)
Daro_2754PAS/PAC sensor hybrid histidine kinase. (1275 aa)
Daro_2787Hpt sensor hybrid histidine kinase. (909 aa)
Daro_2788Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. (715 aa)
Daro_2798Response regulator receiver. (306 aa)
Daro_2811PAS protein. (1023 aa)
Daro_2825PAS:GGDEF protein. (548 aa)
Daro_2847PAS protein. (764 aa)
Daro_2881Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-. (367 aa)
Daro_2890Peptidase M52, hydrogen uptake protein. (1053 aa)
Daro_2891Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. (858 aa)
Daro_2901Hpt. (112 aa)
Daro_2934PAS protein. (955 aa)
Daro_2946Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal. (777 aa)
Daro_3006PAS protein. (1560 aa)
Daro_3052GGDEF protein. (523 aa)
Daro_3099Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1038 aa)
Daro_3284PAS/PAC sensor signal transduction histidine kinase. (856 aa)
Daro_3350Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt. (923 aa)
Daro_3445Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1094 aa)
Daro_3459Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt. (1055 aa)
Daro_3508Diguanylate cyclase. (638 aa)
Daro_3549PAS/PAC sensor hybrid histidine kinase. (982 aa)
Daro_3571Diguanylate cyclase/phosphodiesterase. (611 aa)
Daro_3623Diguanylate cyclase with PAS/PAC sensor. (583 aa)
Daro_3686Signal transduction histidine kinase. (620 aa)
Daro_3688Response regulator receiver modulated diguanylate cyclase. (543 aa)
Daro_3714PAS protein. (1028 aa)
Daro_3743Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (722 aa)
Daro_3744Histidine kinase. (718 aa)
Daro_3750PAS:GGDEF protein. (721 aa)
Daro_3754Diguanylate cyclase/phosphodiesterase. (561 aa)
Daro_3813PAS/PAC sensor hybrid histidine kinase. (963 aa)
Daro_3821Cache sensor hybrid histidine kinase. (759 aa)
Daro_3846PAS/PAC sensor hybrid histidine kinase. (860 aa)
Daro_3872PAS protein. (853 aa)
Daro_3954PAS:GGDEF:Hemerythrin HHE cation binding region. (667 aa)
Daro_3990Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1665 aa)
Daro_4037Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal. (659 aa)
Daro_4048Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (739 aa)
Daro_4086Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal. (631 aa)
Daro_4142PAS/PAC sensor hybrid histidine kinase. (916 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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