STRINGSTRING
Daro_0040 Daro_0040 Daro_0223 Daro_0223 Daro_0240 Daro_0240 Daro_0244 Daro_0244 Daro_0551 Daro_0551 Daro_0937 Daro_0937 Daro_1934 Daro_1934 Daro_2754 Daro_2754 Daro_2787 Daro_2787 Daro_2788 Daro_2788 Daro_2811 Daro_2811 Daro_2847 Daro_2847 Daro_2890 Daro_2890 Daro_2934 Daro_2934 Daro_3006 Daro_3006 Daro_3350 Daro_3350 Daro_3459 Daro_3459 Daro_3549 Daro_3549 Daro_3714 Daro_3714 Daro_3813 Daro_3813 Daro_3872 Daro_3872 Daro_4142 Daro_4142
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_0040PAS/PAC sensor hybrid histidine kinase. (1193 aa)
Daro_0223PAS protein. (1214 aa)
Daro_0240Hpt sensor hybrid histidine kinase. (1005 aa)
Daro_0244PAS/PAC sensor hybrid histidine kinase. (1066 aa)
Daro_0551PAS protein. (1026 aa)
Daro_0937Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Hpt. (852 aa)
Daro_1934PAS/PAC sensor hybrid histidine kinase. (1015 aa)
Daro_2754PAS/PAC sensor hybrid histidine kinase. (1275 aa)
Daro_2787Hpt sensor hybrid histidine kinase. (909 aa)
Daro_2788Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. (715 aa)
Daro_2811PAS protein. (1023 aa)
Daro_2847PAS protein. (764 aa)
Daro_2890Peptidase M52, hydrogen uptake protein. (1053 aa)
Daro_2934PAS protein. (955 aa)
Daro_3006PAS protein. (1560 aa)
Daro_3350Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt. (923 aa)
Daro_3459Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt. (1055 aa)
Daro_3549PAS/PAC sensor hybrid histidine kinase. (982 aa)
Daro_3714PAS protein. (1028 aa)
Daro_3813PAS/PAC sensor hybrid histidine kinase. (963 aa)
Daro_3872PAS protein. (853 aa)
Daro_4142PAS/PAC sensor hybrid histidine kinase. (916 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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