(11 nodes) Periplasmic sensor-like domain superfamily, and cheY-homologous receiver domain network (Dechloromonas aromatica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Daro_0575	Two component transcriptional regulator, winged helix family. (227 aa)
	Daro_1005	ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. (497 aa)
	Daro_1330	Response regulator receiver. (400 aa)
	Daro_1665	Response regulator receiver modulated diguanylate cyclase. (313 aa)
	Daro_1667	ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. (652 aa)
	Daro_1680	Response regulator receiver. (130 aa)
	Daro_2586	ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal. (623 aa)
	Daro_2960	Response regulator receiver. (190 aa)
	Daro_3172	Response regulator receiver. (374 aa)
	Daro_3308	ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal. (845 aa)
	Daro_3309	Response regulator receiver. (121 aa)

Your Current Organism:

Dechloromonas aromatica

NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Daro_0575	Daro_1005	Two component transcriptional regulator, winged helix family.	ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.	0.407
Daro_0575	Daro_1330	Two component transcriptional regulator, winged helix family.	Response regulator receiver.	0.624
Daro_0575	Daro_1667	Two component transcriptional regulator, winged helix family.	ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.	0.401
Daro_0575	Daro_1680	Two component transcriptional regulator, winged helix family.	Response regulator receiver.	0.677
Daro_0575	Daro_2586	Two component transcriptional regulator, winged helix family.	ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal.	0.638
Daro_0575	Daro_2960	Two component transcriptional regulator, winged helix family.	Response regulator receiver.	0.765
Daro_0575	Daro_3308	Two component transcriptional regulator, winged helix family.	ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal.	0.407
Daro_0575	Daro_3309	Two component transcriptional regulator, winged helix family.	Response regulator receiver.	0.539
Daro_1005	Daro_0575	ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.	Two component transcriptional regulator, winged helix family.	0.407
Daro_1005	Daro_1330	ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.	Response regulator receiver.	0.773
Daro_1005	Daro_1665	ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.	Response regulator receiver modulated diguanylate cyclase.	0.708
Daro_1005	Daro_1680	ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.	Response regulator receiver.	0.670
Daro_1005	Daro_2586	ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.	ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal.	0.723
Daro_1005	Daro_2960	ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.	Response regulator receiver.	0.639
Daro_1005	Daro_3172	ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.	Response regulator receiver.	0.503
Daro_1005	Daro_3309	ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.	Response regulator receiver.	0.787
Daro_1330	Daro_0575	Response regulator receiver.	Two component transcriptional regulator, winged helix family.	0.624
Daro_1330	Daro_1005	Response regulator receiver.	ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.	0.773
Daro_1330	Daro_1667	Response regulator receiver.	ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.	0.772
Daro_1330	Daro_1680	Response regulator receiver.	Response regulator receiver.	0.787