STRINGSTRING
Daro_0722 Daro_0722 Daro_0723 Daro_0723 flhB flhB flhA flhA Daro_0741 Daro_0741 Daro_0742 Daro_0742 fliA fliA Daro_0744 Daro_0744 Daro_0745 Daro_0745 Daro_0746 Daro_0746 Daro_0747 Daro_0747 Daro_0748 Daro_0748 Daro_0749 Daro_0749 Daro_0750 Daro_0750 Daro_0751 Daro_0751 Daro_0752 Daro_0752 Daro_0753 Daro_0753 Daro_0754 Daro_0754 flgH flgH flgI flgI Daro_0757 Daro_0757 Daro_0758 Daro_0758 Daro_0759 Daro_0759 Daro_0761 Daro_0761 fliQ fliQ fliP fliP Daro_0764 Daro_0764 Daro_0765 Daro_0765 Daro_0766 Daro_0766 Daro_0767 Daro_0767 Daro_0768 Daro_0768 Daro_0769 Daro_0769 Daro_0770 Daro_0770 Daro_0771 Daro_0771 Daro_0772 Daro_0772 Daro_0773 Daro_0773 fliE fliE Daro_0779 Daro_0779 Daro_0781 Daro_0781 Daro_0782 Daro_0782 Daro_0783 Daro_0783 Daro_0784 Daro_0784 Daro_1071 Daro_1071 Daro_1104 Daro_1104 Daro_1846 Daro_1846 Daro_2272 Daro_2272 fliW fliW Daro_3102 Daro_3102
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_0722Chemotaxis motA protein. (285 aa)
Daro_0723OmpA/MotB. (316 aa)
flhBFlagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (379 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (694 aa)
Daro_0741GTP-binding signal recognition particle SRP54, G-domain. (487 aa)
Daro_0742Putative MinD-related protein. (296 aa)
fliARNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (248 aa)
Daro_0744MotA/TolQ/ExbB proton channel. (246 aa)
Daro_0745OmpA/MotB. (257 aa)
Daro_0746FlgN. (154 aa)
Daro_0747Hypothetical protein. (94 aa)
Daro_0748Flagellar protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (225 aa)
Daro_0749Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (135 aa)
Daro_0750Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (137 aa)
Daro_0751Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein. (229 aa)
Daro_0752Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE. (442 aa)
Daro_0753Protein of unknown function DUF1078. (247 aa)
Daro_0754Protein of unknown function DUF1078; Belongs to the flagella basal body rod proteins family. (260 aa)
flgHFlagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (219 aa)
flgIFlagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (364 aa)
Daro_0757Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase. (324 aa)
Daro_0758Protein of unknown function DUF1078; Belongs to the flagella basal body rod proteins family. (683 aa)
Daro_0759Flagellin, N-terminal. (326 aa)
Daro_0761Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (260 aa)
fliQFlagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (83 aa)
fliPFlagellar transport protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (248 aa)
Daro_0764Flagellar biosynthesis protein, FliO. (136 aa)
Daro_0765Type III secretion system outer membrane O protein. (147 aa)
Daro_0766Flagellar motor switch protein FliM. (338 aa)
Daro_0767Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (187 aa)
Daro_0768Flagellar hook-length control protein. (335 aa)
Daro_0769Flagellar FliJ and related protein. (151 aa)
Daro_0770ATPase FliI/YscN. (472 aa)
Daro_0771Flagellar assembly protein FliH. (231 aa)
Daro_0772Flagellar motor switch protein FliG. (334 aa)
Daro_0773Flagellar FliF M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (584 aa)
fliEFlagellar hook-basal body complex protein FliE. (107 aa)
Daro_0779Conserved hypothetical protein. (362 aa)
Daro_0781Flagellar protein FliS. (135 aa)
Daro_0782Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (452 aa)
Daro_0783Flagellar protein FlaG protein. (122 aa)
Daro_0784Flagellin, C-terminal:Flagellin, N-terminal; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (273 aa)
Daro_1071CheW protein. (891 aa)
Daro_1104Hypothetical protein. (332 aa)
Daro_1846Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (134 aa)
Daro_2272Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (153 aa)
fliWUncharacterized protein conserved in bacteria; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. (161 aa)
Daro_3102Conserved hypothetical protein. (242 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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