STRINGSTRING
Daro_0889 Daro_0889 Daro_0890 Daro_0890 Daro_0891 Daro_0891 Daro_0893 Daro_0893 Daro_0895 Daro_0895
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_0889Hypothetical protein. (308 aa)
Daro_0890Hypothetical protein. (216 aa)
Daro_0891Hypothetical protein. (226 aa)
Daro_0893Type II and III secretion system protein:Secretin, N-terminal:Secretin/TonB, short N-terminal. (585 aa)
Daro_0895TPR repeat. (354 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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