11 items (Dechloromonas aromatica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Daro_3216	Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal. (667 aa)
	Daro_3217	Prokaryotic N-terminal methylation site. (159 aa)
	Daro_3218	General secretion pathway protein G. (126 aa)
	Daro_3219	Conserved hypothetical protein. (177 aa)
	Daro_3221	General secretion pathway protein G. (156 aa)
	Daro_3222	Type II secretion system protein. (394 aa)
	Daro_3223	Type II secretion system protein E. (564 aa)
	Daro_3224	Hypothetical protein. (255 aa)
	Daro_3225	Conserved hypothetical protein. (178 aa)
	Daro_3226	Hypothetical protein. (190 aa)
	Daro_3227	Probable proline-rich transmembrane protein. (173 aa)

Your Current Organism:

Dechloromonas aromatica

NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Daro_3216	Daro_3217	Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal.	Prokaryotic N-terminal methylation site.	0.955
Daro_3216	Daro_3218	Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal.	General secretion pathway protein G.	0.951
Daro_3216	Daro_3219	Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal.	Conserved hypothetical protein.	0.953
Daro_3216	Daro_3221	Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal.	General secretion pathway protein G.	0.599
Daro_3216	Daro_3222	Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal.	Type II secretion system protein.	0.690
Daro_3216	Daro_3223	Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal.	Type II secretion system protein E.	0.701
Daro_3216	Daro_3225	Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal.	Conserved hypothetical protein.	0.794
Daro_3216	Daro_3226	Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal.	Hypothetical protein.	0.896
Daro_3216	Daro_3227	Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal.	Probable proline-rich transmembrane protein.	0.796
Daro_3217	Daro_3216	Prokaryotic N-terminal methylation site.	Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal.	0.955
Daro_3217	Daro_3218	Prokaryotic N-terminal methylation site.	General secretion pathway protein G.	0.983
Daro_3217	Daro_3219	Prokaryotic N-terminal methylation site.	Conserved hypothetical protein.	0.952
Daro_3217	Daro_3221	Prokaryotic N-terminal methylation site.	General secretion pathway protein G.	0.942
Daro_3217	Daro_3222	Prokaryotic N-terminal methylation site.	Type II secretion system protein.	0.531
Daro_3217	Daro_3223	Prokaryotic N-terminal methylation site.	Type II secretion system protein E.	0.588
Daro_3217	Daro_3225	Prokaryotic N-terminal methylation site.	Conserved hypothetical protein.	0.790
Daro_3217	Daro_3226	Prokaryotic N-terminal methylation site.	Hypothetical protein.	0.795
Daro_3217	Daro_3227	Prokaryotic N-terminal methylation site.	Probable proline-rich transmembrane protein.	0.800
Daro_3218	Daro_3216	General secretion pathway protein G.	Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal.	0.951
Daro_3218	Daro_3217	General secretion pathway protein G.	Prokaryotic N-terminal methylation site.	0.983