STRINGSTRING
Daro_3221 Daro_3221 Daro_3222 Daro_3222 Daro_3223 Daro_3223 Daro_3225 Daro_3225 Daro_3226 Daro_3226 Daro_3227 Daro_3227
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_3221General secretion pathway protein G. (156 aa)
Daro_3222Type II secretion system protein. (394 aa)
Daro_3223Type II secretion system protein E. (564 aa)
Daro_3225Conserved hypothetical protein. (178 aa)
Daro_3226Hypothetical protein. (190 aa)
Daro_3227Probable proline-rich transmembrane protein. (173 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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