STRINGSTRING
Daro_0637 Daro_0637 Daro_0638 Daro_0638 Daro_0639 Daro_0639 Daro_1151 Daro_1151 Daro_3407 Daro_3407 Daro_3408 Daro_3408
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_0637Type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (284 aa)
Daro_0638Type II secretion system protein. (408 aa)
Daro_0639Type II secretion system protein E:General secretory system II, protein E, N-terminal. (571 aa)
Daro_1151Type II secretion system protein E:General secretory system II, protein E, N-terminal. (622 aa)
Daro_3407Type II secretion system protein E:General secretory system II, protein E, N-terminal. (568 aa)
Daro_3408Type II secretion system protein. (399 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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