STRINGSTRING
Daro_0020 Daro_0020 Daro_0210 Daro_0210 Daro_0211 Daro_0211 Daro_0212 Daro_0212 Daro_0213 Daro_0213 Daro_0214 Daro_0214 Daro_0866 Daro_0866 Daro_3036 Daro_3036 Daro_3037 Daro_3037 Daro_3038 Daro_3038 Daro_3039 Daro_3039 Daro_3040 Daro_3040 Daro_3041 Daro_3041 Daro_3356 Daro_3356
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_0020Peptidoglycan-binding LysM. (343 aa)
Daro_0210Type IV pilus assembly protein PilM. (361 aa)
Daro_0211Fimbrial assembly. (189 aa)
Daro_0212Pilus assembly protein, PilO. (227 aa)
Daro_0213Pilus assembly protein, PilQ. (181 aa)
Daro_0214Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal. (715 aa)
Daro_0866Conserved hypothetical protein. (1036 aa)
Daro_3036Putative Tfp pilus assembly protein tip-associated adhesin PilY1. (1544 aa)
Daro_3037Hypothetical protein. (213 aa)
Daro_3038Hypothetical protein. (332 aa)
Daro_3039Hypothetical protein. (128 aa)
Daro_3040General secretion pathway protein H. (177 aa)
Daro_3041General secretion pathway protein H. (138 aa)
Daro_3356Fimbrial protein pilin:Bacterial general secretion pathway protein H; Belongs to the N-Me-Phe pilin family. (137 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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