Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Daro_4049 | Daro_4054 | Daro_4049 | Daro_4054 | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Cell division and transport-associated protein TolA; TC 2.C.1.2.1. | 0.707 |
| Daro_4049 | Daro_4055 | Daro_4049 | Daro_4055 | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Cell division and transport-associated protein TolR; TC 2.C.1.2.1. | 0.744 |
| Daro_4049 | Daro_4057 | Daro_4049 | Daro_4057 | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 4-hydroxybenzoyl-CoA thioesterase. | 0.743 |
| Daro_4049 | Daro_4058 | Daro_4049 | Daro_4058 | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Conserved hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | 0.702 |
| Daro_4049 | Daro_4059 | Daro_4049 | Daro_4059 | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Conserved hypothetical protein. | 0.646 |
| Daro_4049 | cpoB | Daro_4049 | Daro_4051 | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Conserved hypothetical protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.800 |
| Daro_4049 | pal-4 | Daro_4049 | Daro_4052 | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | OmpA/MotB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.776 |
| Daro_4049 | tolB | Daro_4049 | Daro_4053 | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | TolB, N-terminal:WD40-like Beta Propeller; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.760 |
| Daro_4049 | tolQ | Daro_4049 | Daro_4056 | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.743 |
| Daro_4054 | Daro_4049 | Daro_4054 | Daro_4049 | Cell division and transport-associated protein TolA; TC 2.C.1.2.1. | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.707 |
| Daro_4054 | Daro_4055 | Daro_4054 | Daro_4055 | Cell division and transport-associated protein TolA; TC 2.C.1.2.1. | Cell division and transport-associated protein TolR; TC 2.C.1.2.1. | 0.780 |
| Daro_4054 | Daro_4057 | Daro_4054 | Daro_4057 | Cell division and transport-associated protein TolA; TC 2.C.1.2.1. | 4-hydroxybenzoyl-CoA thioesterase. | 0.806 |
| Daro_4054 | Daro_4058 | Daro_4054 | Daro_4058 | Cell division and transport-associated protein TolA; TC 2.C.1.2.1. | Conserved hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | 0.773 |
| Daro_4054 | Daro_4059 | Daro_4054 | Daro_4059 | Cell division and transport-associated protein TolA; TC 2.C.1.2.1. | Conserved hypothetical protein. | 0.709 |
| Daro_4054 | cpoB | Daro_4054 | Daro_4051 | Cell division and transport-associated protein TolA; TC 2.C.1.2.1. | Conserved hypothetical protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.799 |
| Daro_4054 | pal-4 | Daro_4054 | Daro_4052 | Cell division and transport-associated protein TolA; TC 2.C.1.2.1. | OmpA/MotB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.747 |
| Daro_4054 | tolB | Daro_4054 | Daro_4053 | Cell division and transport-associated protein TolA; TC 2.C.1.2.1. | TolB, N-terminal:WD40-like Beta Propeller; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.800 |
| Daro_4054 | tolQ | Daro_4054 | Daro_4056 | Cell division and transport-associated protein TolA; TC 2.C.1.2.1. | Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.800 |
| Daro_4055 | Daro_4049 | Daro_4055 | Daro_4049 | Cell division and transport-associated protein TolR; TC 2.C.1.2.1. | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.744 |
| Daro_4055 | Daro_4054 | Daro_4055 | Daro_4054 | Cell division and transport-associated protein TolR; TC 2.C.1.2.1. | Cell division and transport-associated protein TolA; TC 2.C.1.2.1. | 0.780 |
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