5 items (Dechloromonas aromatica) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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Your Input:
	bamB	Pyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (386 aa)
	Daro_2983	Putative transmembrane protein. (212 aa)
	Daro_2986	Conserved hypothetical protein. (311 aa)
	Daro_2987	TPR repeat. (266 aa)
	rlmN	23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. (364 aa)

Your Current Organism:

Dechloromonas aromatica

NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Daro_2983	Daro_2986	Daro_2983	Daro_2986	Putative transmembrane protein.	Conserved hypothetical protein.	0.825
Daro_2983	Daro_2987	Daro_2983	Daro_2987	Putative transmembrane protein.	TPR repeat.	0.800
Daro_2983	bamB	Daro_2983	Daro_2982	Putative transmembrane protein.	Pyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	0.970
Daro_2983	rlmN	Daro_2983	Daro_2988	Putative transmembrane protein.	23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	0.820
Daro_2986	Daro_2983	Daro_2986	Daro_2983	Conserved hypothetical protein.	Putative transmembrane protein.	0.825
Daro_2986	Daro_2987	Daro_2986	Daro_2987	Conserved hypothetical protein.	TPR repeat.	0.831
Daro_2986	bamB	Daro_2986	Daro_2982	Conserved hypothetical protein.	Pyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	0.824
Daro_2986	rlmN	Daro_2986	Daro_2988	Conserved hypothetical protein.	23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	0.831
Daro_2987	Daro_2983	Daro_2987	Daro_2983	TPR repeat.	Putative transmembrane protein.	0.800
Daro_2987	Daro_2986	Daro_2987	Daro_2986	TPR repeat.	Conserved hypothetical protein.	0.831
Daro_2987	bamB	Daro_2987	Daro_2982	TPR repeat.	Pyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	0.800
Daro_2987	rlmN	Daro_2987	Daro_2988	TPR repeat.	23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	0.817
bamB	Daro_2983	Daro_2982	Daro_2983	Pyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	Putative transmembrane protein.	0.970
bamB	Daro_2986	Daro_2982	Daro_2986	Pyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	Conserved hypothetical protein.	0.824
bamB	Daro_2987	Daro_2982	Daro_2987	Pyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	TPR repeat.	0.800
bamB	rlmN	Daro_2982	Daro_2988	Pyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	0.792
rlmN	Daro_2983	Daro_2988	Daro_2983	23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	Putative transmembrane protein.	0.820
rlmN	Daro_2986	Daro_2988	Daro_2986	23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	Conserved hypothetical protein.	0.831
rlmN	Daro_2987	Daro_2988	Daro_2987	23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	TPR repeat.	0.817
rlmN	bamB	Daro_2988	Daro_2982	23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	Pyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	0.792