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Daro_0445 Daro_0445 Daro_0713 Daro_0713 Daro_0714 Daro_0714 Daro_0715 Daro_0715 Daro_0716 Daro_0716 Daro_1065 Daro_1065 Daro_1462 Daro_1462 ctaB ctaB Daro_1464 Daro_1464 Daro_1465 Daro_1465 Daro_1466 Daro_1466 Daro_1467 Daro_1467 Daro_1468 Daro_1468 Daro_1470 Daro_1470 Daro_1471 Daro_1471 Daro_2492 Daro_2492
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_0445Putative denitrification protein NorE. (199 aa)
Daro_0713Cytochrome c oxidase cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family. (475 aa)
Daro_0714Cytochrome C oxidase, mono-heme subunit/FixO. (211 aa)
Daro_0715Cbb3-type cytochrome oxidase component. (58 aa)
Daro_0716Cytochrome c oxidase cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (299 aa)
Daro_1065Putative denitrification protein NorE. (201 aa)
Daro_1462Cytochrome oxidase assembly. (348 aa)
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (298 aa)
Daro_1464Probable transmembrane protein. (192 aa)
Daro_1465Surfeit locus 1. (228 aa)
Daro_1466Conserved hypothetical protein. (69 aa)
Daro_1467Cytochrome c oxidase, subunit III. (290 aa)
Daro_1468Cytochrome c oxidase assembly protein CtaG/Cox11. (203 aa)
Daro_1470Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (531 aa)
Daro_1471Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (401 aa)
Daro_2492Cytochrome c, class I. (698 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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