STRINGSTRING
Daro_1236 Daro_1236 Daro_1237 Daro_1237 Daro_1238 Daro_1238 Daro_1239 Daro_1239 Daro_1241 Daro_1241 Daro_1242 Daro_1242 Daro_1243 Daro_1243 Daro_1244 Daro_1244 Daro_1246 Daro_1246 Daro_1247 Daro_1247 Daro_1248 Daro_1248 Daro_1249 Daro_1249 Daro_1250 Daro_1250 Daro_1251 Daro_1251 Daro_1252 Daro_1252 Daro_1253 Daro_1253 Daro_1254 Daro_1254 Daro_1255 Daro_1255 Daro_1256 Daro_1256 Daro_1257 Daro_1257 Daro_1258 Daro_1258 Daro_1259 Daro_1259 Daro_1260 Daro_1260 Daro_1261 Daro_1261 Daro_1262 Daro_1262 Daro_1263 Daro_1263 Daro_1264 Daro_1264 Daro_1265 Daro_1265 Daro_1284 Daro_1284 Daro_1735 Daro_1735 Daro_1741 Daro_1741 Daro_3930 Daro_3930
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_1236UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (334 aa)
Daro_1237dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (354 aa)
Daro_1238Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (296 aa)
Daro_1239dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (177 aa)
Daro_1241Hypothetical protein. (123 aa)
Daro_1242DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (392 aa)
Daro_1243Hypothetical protein. (188 aa)
Daro_1244Aldo/keto reductase. (312 aa)
Daro_1246Surface polysaccharide biosynthesis protein, transferase. (359 aa)
Daro_1247GCN5-related N-acetyltransferase. (418 aa)
Daro_1248N-acetylneuraminate synthase. (348 aa)
Daro_1249LmbE-like protein. (223 aa)
Daro_1250Hypothetical protein. (587 aa)
Daro_1251Polysaccharide biosynthesis protein. (512 aa)
Daro_1252Hypothetical protein. (394 aa)
Daro_1253Hypothetical protein. (255 aa)
Daro_1254Glycosyl transferase, group 1. (398 aa)
Daro_1255NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase. (325 aa)
Daro_1256Nucleotidyl transferase. (257 aa)
Daro_1257NAD-dependent epimerase/dehydratase:Polysaccharide biosynthesis protein CapD. (365 aa)
Daro_1258dTDP-4-dehydrorhamnose epimerase. (158 aa)
Daro_1259NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase. (310 aa)
Daro_1260Glycosyl transferase, family 2. (309 aa)
Daro_1261Glycosyl transferase, group 1. (402 aa)
Daro_1262Glycosyl transferase, group 1. (405 aa)
Daro_1263dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (284 aa)
Daro_1264UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase; NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase. (336 aa)
Daro_1265UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (372 aa)
Daro_1284UDP-glucose/GDP-mannose dehydrogenase. (439 aa)
Daro_1735UDP-glucose pyrophosphorylase. (289 aa)
Daro_1741dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (320 aa)
Daro_3930UDP-glucuronate 4-epimerase; NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase:Nucleotide sugar epimerase. (335 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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