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Daro_0150 Daro_0150 Daro_0152 Daro_0152 Daro_0153 Daro_0153 msbA msbA Daro_0155 Daro_0155 Daro_0156 Daro_0156 Daro_0157 Daro_0157 Daro_0158 Daro_0158 Daro_0159 Daro_0159 Daro_0160 Daro_0160 Daro_0161 Daro_0161 Daro_0162 Daro_0162 Daro_0486 Daro_0486 gmhA gmhA Daro_1285 Daro_1285 hldD hldD Daro_3296 Daro_3296 Daro_3536 Daro_3536 Daro_3928 Daro_3928
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_0150Conserved hypothetical protein. (370 aa)
Daro_0152Lipopolysaccharide heptosyltransferase III, putative. (367 aa)
Daro_0153Glycosyl transferase, group 1. (381 aa)
msbALipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (585 aa)
Daro_0155Glycosyl transferase, group 1. (361 aa)
Daro_0156Polysaccharide deacetylase. (276 aa)
Daro_0157Glycosyl transferase, family 9. (382 aa)
Daro_0158Glycosyl transferase, group 1. (398 aa)
Daro_0159Glycosyl transferase, family 9. (381 aa)
Daro_0160Glycosyl transferase, group 1. (379 aa)
Daro_0161O-antigen polymerase. (440 aa)
Daro_0162Glycosyl transferase, family 9. (319 aa)
Daro_0486Cytidyltransferase-related protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. (162 aa)
gmhAPhosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. (196 aa)
Daro_1285D-alpha,beta-D-heptose 7-phosphate 1-kinase. (312 aa)
hldDADP-glyceromanno-heptose 6-epimerase precursor; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. (332 aa)
Daro_3296Lipopolysaccharide heptosyltransferase II. (337 aa)
Daro_3536D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase. (183 aa)
Daro_3928Lipopolysaccharide heptosyltransferase I. (317 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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