STRINGSTRING
lipA lipA lipB lipB Daro_0289 Daro_0289 Daro_0292 Daro_0292 htpX-2 htpX-2 Daro_0294 Daro_0294 Daro_0295 Daro_0295 Daro_0296 Daro_0296 Daro_0298 Daro_0298 Daro_1176 Daro_1176 Daro_1177 Daro_1177 Daro_1178 Daro_1178 Daro_1874 Daro_1874 Daro_1875 Daro_1875 Daro_1876 Daro_1876 Daro_1877 Daro_1877 Daro_2159 Daro_2159 Daro_2160 Daro_2160 Daro_2161 Daro_2161 Daro_2162 Daro_2162 Daro_2252 Daro_2252 Daro_2253 Daro_2253 Daro_2254 Daro_2254 Daro_2263 Daro_2263 Daro_2264 Daro_2264 Daro_2265 Daro_2265 Daro_2477 Daro_2477 Daro_2478 Daro_2478 Daro_2479 Daro_2479 Daro_2480 Daro_2480 Daro_2615 Daro_2615 Daro_2616 Daro_2616 Daro_2617 Daro_2617 Daro_2618 Daro_2618 Daro_2619 Daro_2619 Daro_2620 Daro_2620 Daro_2621 Daro_2621 Daro_2622 Daro_2622 Daro_2625 Daro_2625 Daro_2626 Daro_2626 Daro_2627 Daro_2627 Daro_2628 Daro_2628 Daro_2629 Daro_2629 Daro_3826 Daro_3826 Daro_3827 Daro_3827 Daro_3828 Daro_3828 Daro_3829 Daro_3829 Daro_3830 Daro_3830 Daro_3926 Daro_3926
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lipALipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (314 aa)
lipBLipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. (205 aa)
Daro_0289Protein of unknown function DUF493; Belongs to the UPF0250 family. (89 aa)
Daro_0292Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (302 aa)
htpX-2Heat shock protein, Metallo peptidase, MEROPS family M48B; Belongs to the peptidase M48B family. (292 aa)
Daro_0294Outer membrane efflux protein. (420 aa)
Daro_0295Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (379 aa)
Daro_0296Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1036 aa)
Daro_0298PAS protein. (306 aa)
Daro_1176Outer membrane efflux protein. (429 aa)
Daro_1177Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (397 aa)
Daro_1178Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1033 aa)
Daro_1874Cyclase/dehydrase. (180 aa)
Daro_1875Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1029 aa)
Daro_1876Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (375 aa)
Daro_1877Outer membrane efflux protein. (413 aa)
Daro_2159Transcriptional regulator, TetR family. (205 aa)
Daro_2160Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (391 aa)
Daro_2161Hydrophobe/amphiphile efflux-1 HAE1. (1040 aa)
Daro_2162RND efflux system, outer membrane lipoprotein, NodT. (475 aa)
Daro_2252Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1032 aa)
Daro_2253Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (398 aa)
Daro_2254Outer membrane efflux protein. (436 aa)
Daro_2263Outer membrane efflux protein. (424 aa)
Daro_2264Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (546 aa)
Daro_2265Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1051 aa)
Daro_2477Conserved hypothetical protein. (105 aa)
Daro_2478Outer membrane efflux protein. (416 aa)
Daro_2479Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (504 aa)
Daro_2480Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1044 aa)
Daro_2615Hypothetical protein. (142 aa)
Daro_2616Hypothetical protein. (127 aa)
Daro_2617Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1039 aa)
Daro_2618Hypothetical protein. (340 aa)
Daro_2619Hypothetical protein. (186 aa)
Daro_2620Outer membrane efflux protein. (432 aa)
Daro_2621Hypothetical protein. (118 aa)
Daro_2622Protein of unknown function DUF411. (145 aa)
Daro_2625Nitrogen regulatory protein P-II. (112 aa)
Daro_2626Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1032 aa)
Daro_2627Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (399 aa)
Daro_2628Outer membrane efflux protein. (432 aa)
Daro_2629Hypothetical protein. (116 aa)
Daro_3826Metallophosphoesterase. (389 aa)
Daro_3827RND efflux system, outer membrane lipoprotein, NodT. (504 aa)
Daro_3828Hydrophobe/amphiphile efflux-1 HAE1. (1062 aa)
Daro_3829Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (387 aa)
Daro_3830Esterase/lipase/thioesterase. (290 aa)
Daro_3926Type I secretion outer membrane protein, TolC. (441 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.