22 items (Dechloromonas aromatica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Daro_1176	Outer membrane efflux protein. (429 aa)
	Daro_1177	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (397 aa)
	Daro_1178	Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1033 aa)
	Daro_1874	Cyclase/dehydrase. (180 aa)
	Daro_1875	Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1029 aa)
	Daro_1876	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (375 aa)
	Daro_1877	Outer membrane efflux protein. (413 aa)
	Daro_2252	Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1032 aa)
	Daro_2253	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (398 aa)
	Daro_2254	Outer membrane efflux protein. (436 aa)
	Daro_2263	Outer membrane efflux protein. (424 aa)
	Daro_2264	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (546 aa)
	Daro_2265	Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1051 aa)
	Daro_2477	Conserved hypothetical protein. (105 aa)
	Daro_2478	Outer membrane efflux protein. (416 aa)
	Daro_2479	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (504 aa)
	Daro_2480	Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1044 aa)
	Daro_2625	Nitrogen regulatory protein P-II. (112 aa)
	Daro_2626	Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1032 aa)
	Daro_2627	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (399 aa)
	Daro_2628	Outer membrane efflux protein. (432 aa)
	Daro_2629	Hypothetical protein. (116 aa)

Your Current Organism:

Dechloromonas aromatica

NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Daro_1176	Daro_1177	Outer membrane efflux protein.	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.917
Daro_1176	Daro_1178	Outer membrane efflux protein.	Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.896
Daro_1176	Daro_1875	Outer membrane efflux protein.	Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.598
Daro_1176	Daro_1876	Outer membrane efflux protein.	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.734
Daro_1176	Daro_2252	Outer membrane efflux protein.	Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.506
Daro_1176	Daro_2253	Outer membrane efflux protein.	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.714
Daro_1176	Daro_2254	Outer membrane efflux protein.	Outer membrane efflux protein.	0.761
Daro_1176	Daro_2263	Outer membrane efflux protein.	Outer membrane efflux protein.	0.419
Daro_1176	Daro_2264	Outer membrane efflux protein.	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.751
Daro_1176	Daro_2265	Outer membrane efflux protein.	Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.547
Daro_1176	Daro_2478	Outer membrane efflux protein.	Outer membrane efflux protein.	0.449
Daro_1176	Daro_2479	Outer membrane efflux protein.	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.744
Daro_1176	Daro_2480	Outer membrane efflux protein.	Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.541
Daro_1176	Daro_2626	Outer membrane efflux protein.	Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.508
Daro_1176	Daro_2627	Outer membrane efflux protein.	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.704
Daro_1176	Daro_2628	Outer membrane efflux protein.	Outer membrane efflux protein.	0.755
Daro_1177	Daro_1176	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Outer membrane efflux protein.	0.917
Daro_1177	Daro_1178	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.960
Daro_1177	Daro_1875	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.830
Daro_1177	Daro_1877	Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Outer membrane efflux protein.	0.693