STRINGSTRING
Daro_0986 Daro_0986 Daro_0987 Daro_0987 Daro_0988 Daro_0988 Daro_0989 Daro_0989 Daro_0990 Daro_0990 Daro_1096 Daro_1096 Daro_1097 Daro_1097 Daro_1098 Daro_1098 Daro_1099 Daro_1099 Daro_1100 Daro_1100 Daro_1101 Daro_1101 Daro_1102 Daro_1102 Daro_1103 Daro_1103 Daro_1339 Daro_1339 Daro_1868 Daro_1868 Daro_2420 Daro_2420 Daro_2421 Daro_2421 Daro_2422 Daro_2422 Daro_3214 Daro_3214
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_0986Secretion protein HlyD. (328 aa)
Daro_0987ABC-2:ABC transporter related protein. (920 aa)
Daro_0988ABC-2 protein. (374 aa)
Daro_0989Hypothetical protein. (237 aa)
Daro_0990Peptidylprolyl isomerase, FKBP-type. (135 aa)
Daro_1096Major facilitator superfamily MFS_1. (399 aa)
Daro_1097Luciferase-like protein. (334 aa)
Daro_1098Protein of unknown function DUF6, transmembrane. (305 aa)
Daro_1099NADH:flavin oxidoreductase/NADH oxidase. (360 aa)
Daro_1100Transcriptional regulator, TetR family. (194 aa)
Daro_1101Hypothetical protein. (200 aa)
Daro_1102Metal-dependent phosphohydrolase, HD subdomain. (240 aa)
Daro_1103Glutaredoxin family protein. (130 aa)
Daro_1339Nitroreductase. (211 aa)
Daro_1868Dihydropteridine reductase. (216 aa)
Daro_2420Hypothetical protein. (399 aa)
Daro_2421Membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family. (527 aa)
Daro_2422TPR repeat. (242 aa)
Daro_3214Protein of unknown function DUF181. (734 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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