STRINGSTRING
Daro_0249 Daro_0249 Daro_0250 Daro_0250 Daro_0251 Daro_0251 Daro_0252 Daro_0252 Daro_0253 Daro_0253 Daro_0254 Daro_0254 Daro_0255 Daro_0255 Daro_0256 Daro_0256 Daro_0270 Daro_0270 Daro_0271 Daro_0271 Daro_0272 Daro_0272 Daro_0273 Daro_0273 Daro_0274 Daro_0274 Daro_0364 Daro_0364 Daro_0365 Daro_0365 Daro_0366 Daro_0366 Daro_0367 Daro_0367 Daro_0376 Daro_0376 Daro_0524 Daro_0524 Daro_0900 Daro_0900 Daro_0904 Daro_0904 Daro_0908 Daro_0908 Daro_0909 Daro_0909 Daro_0920 Daro_0920 Daro_0921 Daro_0921 ureG ureG ureF ureF ureE ureE ureC ureC ureB ureB ureA ureA ureD ureD Daro_1431 Daro_1431 Daro_1432 Daro_1432 Daro_1433 Daro_1433 Daro_1434 Daro_1434 Daro_1435 Daro_1435 Daro_1436 Daro_1436 Daro_1437 Daro_1437 Daro_1439 Daro_1439 Daro_1440 Daro_1440 Daro_1443 Daro_1443 Daro_2356 Daro_2356 Daro_2357 Daro_2357 Daro_2358 Daro_2358 Daro_2359 Daro_2359 Daro_2360 Daro_2360 Daro_2712 Daro_2712 Daro_2745 Daro_2745 Daro_2765 Daro_2765 Daro_2766 Daro_2766 Daro_2767 Daro_2767 Daro_2768 Daro_2768 Daro_2769 Daro_2769 Daro_2770 Daro_2770 Daro_2771 Daro_2771 Daro_2772 Daro_2772 Daro_2947 Daro_2947 Daro_3234 Daro_3234 Daro_3235 Daro_3235 Daro_3236 Daro_3236 Daro_3241 Daro_3241 Daro_3540 Daro_3540 Daro_3541 Daro_3541 Daro_4043 Daro_4043 Daro_4044 Daro_4044 Daro_4045 Daro_4045 Daro_4046 Daro_4046 Daro_4047 Daro_4047 Daro_4096 Daro_4096 Daro_4097 Daro_4097 Daro_4098 Daro_4098 Daro_4099 Daro_4099
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_0249AMP-dependent synthetase and ligase. (655 aa)
Daro_0250Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; TC 3.A.1.4.-. (260 aa)
Daro_0251Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (304 aa)
Daro_0252Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (358 aa)
Daro_0253Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (440 aa)
Daro_0254Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-. (291 aa)
Daro_0255Putative phenylacetate-CoA ligase. (409 aa)
Daro_0256Hypothetical protein. (166 aa)
Daro_0270Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (460 aa)
Daro_0271Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (319 aa)
Daro_0272Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (353 aa)
Daro_0273Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; TC 3.A.1.4.-. (253 aa)
Daro_0274Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-. (234 aa)
Daro_0364Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-. (437 aa)
Daro_0365Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; TC 3.A.1.4.-. (253 aa)
Daro_0366Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (310 aa)
Daro_0367Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (291 aa)
Daro_0376Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (381 aa)
Daro_0524Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (382 aa)
Daro_0900Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (379 aa)
Daro_0904Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (377 aa)
Daro_0908Branched-chain amino acid transport system ATP-binding protein; TC 3.A.1.4.-; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (951 aa)
Daro_0909Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-. (248 aa)
Daro_0920Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (382 aa)
Daro_0921Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (382 aa)
ureGUrease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. (201 aa)
ureFUrease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (228 aa)
ureEUreE urease accessory, N-terminal:UreE urease accessory, C-terminal; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. (175 aa)
ureCUrease, Metallo peptidase, MEROPS family M38; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. (569 aa)
ureBUrease, beta subunit; Belongs to the urease beta subunit family. (101 aa)
ureAUrease, gamma subunit region; Belongs to the urease gamma subunit family. (100 aa)
ureDUrease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (288 aa)
Daro_1431GCN5-related N-acetyltransferase. (142 aa)
Daro_1432Conserved hypothetical protein. (248 aa)
Daro_1433Integrase, catalytic region. (386 aa)
Daro_1434Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-. (230 aa)
Daro_1435ABC transporter related protein. (278 aa)
Daro_1436Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (371 aa)
Daro_1437Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (525 aa)
Daro_1439Hypothetical protein. (72 aa)
Daro_1440Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (398 aa)
Daro_1443Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (420 aa)
Daro_2356Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-. (269 aa)
Daro_2357Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (389 aa)
Daro_2358Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (348 aa)
Daro_2359Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (292 aa)
Daro_2360Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; TC 3.A.1.4.-. (278 aa)
Daro_2712Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (405 aa)
Daro_2745Oxidoreductase FAD-binding region. (438 aa)
Daro_2765Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (408 aa)
Daro_2766Protein of unknown function DUF6, transmembrane. (289 aa)
Daro_2767Hemerythrin HHE cation binding region. (189 aa)
Daro_2768Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-. (237 aa)
Daro_2769Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; TC 3.A.1.4.-. (257 aa)
Daro_2770Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (320 aa)
Daro_2771Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (288 aa)
Daro_2772Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (390 aa)
Daro_2947Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (367 aa)
Daro_3234Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-. (248 aa)
Daro_3235Branched-chain amino acid transport system permease protein; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (597 aa)
Daro_3236Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (349 aa)
Daro_3241Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (381 aa)
Daro_3540Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (377 aa)
Daro_3541Conserved hypothetical protein. (204 aa)
Daro_4043Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (388 aa)
Daro_4044Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (304 aa)
Daro_4045Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (315 aa)
Daro_4046Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; TC 3.A.1.4.-. (251 aa)
Daro_4047Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-. (236 aa)
Daro_4096Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (379 aa)
Daro_4097Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (379 aa)
Daro_4098Branched-chain amino acid transport system ATP-binding protein; TC 3.A.1.4.-; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (950 aa)
Daro_4099Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-. (251 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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