11 items (Dechloromonas aromatica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Daro_1440	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (398 aa)
	Daro_2356	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-. (269 aa)
	Daro_2357	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (389 aa)
	Daro_2358	Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (348 aa)
	Daro_2359	Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (292 aa)
	Daro_2360	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; TC 3.A.1.4.-. (278 aa)
	Daro_4043	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (388 aa)
	Daro_4044	Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (304 aa)
	Daro_4045	Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (315 aa)
	Daro_4046	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; TC 3.A.1.4.-. (251 aa)
	Daro_4047	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-. (236 aa)

Your Current Organism:

Dechloromonas aromatica

NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Daro_1440	Daro_2356	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-.	0.610
Daro_1440	Daro_2358	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.	0.761
Daro_1440	Daro_2359	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.	0.781
Daro_1440	Daro_2360	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; TC 3.A.1.4.-.	0.600
Daro_1440	Daro_4044	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.	0.820
Daro_1440	Daro_4045	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.	0.826
Daro_1440	Daro_4046	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; TC 3.A.1.4.-.	0.669
Daro_1440	Daro_4047	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-.	0.724
Daro_2356	Daro_1440	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	0.610
Daro_2356	Daro_2357	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	0.917
Daro_2356	Daro_2358	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.	0.965
Daro_2356	Daro_2359	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.	0.953
Daro_2356	Daro_2360	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; TC 3.A.1.4.-.	0.873
Daro_2356	Daro_4043	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	0.458
Daro_2356	Daro_4044	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.	0.750
Daro_2356	Daro_4045	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.	0.847
Daro_2356	Daro_4046	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; TC 3.A.1.4.-.	0.509
Daro_2357	Daro_2356	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-.	0.917
Daro_2357	Daro_2358	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.	0.945
Daro_2357	Daro_2359	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.	0.939