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Daro_4098 Daro_4098 Daro_0252 Daro_0252 Daro_0272 Daro_0272 Daro_0366 Daro_0366 Daro_0908 Daro_0908 Daro_1436 Daro_1436 Daro_2358 Daro_2358 Daro_2770 Daro_2770 Daro_3235 Daro_3235 Daro_4045 Daro_4045
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_4098Branched-chain amino acid transport system ATP-binding protein; TC 3.A.1.4.-; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (950 aa)
Daro_0252Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (358 aa)
Daro_0272Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (353 aa)
Daro_0366Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (310 aa)
Daro_0908Branched-chain amino acid transport system ATP-binding protein; TC 3.A.1.4.-; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (951 aa)
Daro_1436Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (371 aa)
Daro_2358Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (348 aa)
Daro_2770Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (320 aa)
Daro_3235Branched-chain amino acid transport system permease protein; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (597 aa)
Daro_4045Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family. (315 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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