STRINGSTRING
Daro_0152 Daro_0152 Daro_0153 Daro_0153 Daro_0155 Daro_0155 Daro_0157 Daro_0157 Daro_0158 Daro_0158 Daro_0159 Daro_0159 Daro_0160 Daro_0160 Daro_0162 Daro_0162 Daro_0178 Daro_0178 Daro_0471 Daro_0471 glgA glgA glgC glgC glgB glgB Daro_1238 Daro_1238 Daro_1254 Daro_1254 Daro_1261 Daro_1261 Daro_1262 Daro_1262 Daro_1264 Daro_1264 Daro_1269 Daro_1269 Daro_1270 Daro_1270 Daro_1272 Daro_1272 Daro_1273 Daro_1273 Daro_1274 Daro_1274 Daro_1276 Daro_1276 Daro_1278 Daro_1278 Daro_1567 Daro_1567 Daro_1871 Daro_1871 kdsA kdsA Daro_2398 Daro_2398 Daro_2399 Daro_2399 Daro_2404 Daro_2404 Daro_2405 Daro_2405 Daro_2407 Daro_2407 Daro_2409 Daro_2409 Daro_2410 Daro_2410 Daro_2414 Daro_2414 Daro_2416 Daro_2416 Daro_2419 Daro_2419 Daro_2421 Daro_2421 Daro_2427 Daro_2427 Daro_2758 Daro_2758 Daro_2759 Daro_2759 Daro_2908 Daro_2908 Daro_3000 Daro_3000 kdsB kdsB Daro_3296 Daro_3296 Daro_3419 Daro_3419 Daro_3478 Daro_3478 Daro_3480 Daro_3480 Daro_3543 Daro_3543 Daro_3547 Daro_3547 Daro_3551 Daro_3551 Daro_3927 Daro_3927 Daro_3928 Daro_3928 Daro_4193 Daro_4193
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_0152Lipopolysaccharide heptosyltransferase III, putative. (367 aa)
Daro_0153Glycosyl transferase, group 1. (381 aa)
Daro_0155Glycosyl transferase, group 1. (361 aa)
Daro_0157Glycosyl transferase, family 9. (382 aa)
Daro_0158Glycosyl transferase, group 1. (398 aa)
Daro_0159Glycosyl transferase, family 9. (381 aa)
Daro_0160Glycosyl transferase, group 1. (379 aa)
Daro_0162Glycosyl transferase, family 9. (319 aa)
Daro_0178Acyltransferase 3. (369 aa)
Daro_0471phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase. (555 aa)
glgAGlycogen synthase (ADP-glucose); Synthesizes alpha-1,4-glucan chains using ADP-glucose. (485 aa)
glgCGlucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (440 aa)
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (621 aa)
Daro_1238Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (296 aa)
Daro_1254Glycosyl transferase, group 1. (398 aa)
Daro_1261Glycosyl transferase, group 1. (402 aa)
Daro_1262Glycosyl transferase, group 1. (405 aa)
Daro_1264UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase; NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase. (336 aa)
Daro_1269Colanic acid biosynthesis glycosyl-transferase. (396 aa)
Daro_1270Glycosyl transferase, family 4. (373 aa)
Daro_1272Hypothetical protein. (400 aa)
Daro_1273Glycosyl transferase, family 2. (307 aa)
Daro_1274Glycosyl transferase, group 1. (359 aa)
Daro_1276Glycosyl transferase, group 1. (387 aa)
Daro_1278NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase. (617 aa)
Daro_1567Periplasmic copper-binding protein. (452 aa)
Daro_1871Acyltransferase 3. (397 aa)
kdsA2-dehydro-3-deoxyphosphooctonate aldolase; Belongs to the KdsA family. (278 aa)
Daro_2398Lipopolysaccharide biosynthesis. (480 aa)
Daro_2399Probable exopolysaccharide biosynthesis protein. (323 aa)
Daro_2404Conserved hypothetical protein. (344 aa)
Daro_2405Glycosyl transferase, group 1. (406 aa)
Daro_2407Glycosyl transferase, group 1. (387 aa)
Daro_2409Glycosyl transferase, group 1. (406 aa)
Daro_2410Glycosyl transferase, group 1. (368 aa)
Daro_2414Polysaccharide biosynthesis protein. (492 aa)
Daro_2416Glycosyl transferase, group 1. (391 aa)
Daro_2419Acyltransferase 3. (342 aa)
Daro_2421Membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family. (527 aa)
Daro_2427Acyltransferase 3. (358 aa)
Daro_2758Glycosyl transferase, family 39. (534 aa)
Daro_2759Glycosyl transferase, family 2. (362 aa)
Daro_2908Periplasmic copper-binding protein. (422 aa)
Daro_3000Conserved hypothetical protein. (540 aa)
kdsB3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (261 aa)
Daro_3296Lipopolysaccharide heptosyltransferase II. (337 aa)
Daro_3419HAD-superfamily hydrolase subfamily IIIA:Phosphatase kdsC. (175 aa)
Daro_3478Conserved hypothetical protein. (506 aa)
Daro_3480Glycosyl transferase, family 2. (336 aa)
Daro_3543Glycosyl transferase, group 1. (373 aa)
Daro_35471,2-diacylglycerol 3-glucosyltransferase. (393 aa)
Daro_3551Glycosyl transferase, family 39. (547 aa)
Daro_3927Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (419 aa)
Daro_3928Lipopolysaccharide heptosyltransferase I. (317 aa)
Daro_4193Glycosyl transferase, family 2. (252 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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