STRINGSTRING
Daro_2759 Daro_2759 Daro_2839 Daro_2839 Daro_2920 Daro_2920 ackA-3 ackA-3 purA purA ndk ndk Daro_3000 Daro_3000 Daro_3047 Daro_3047 queG queG dxs dxs murI murI dut dut Daro_3141 Daro_3141 purN purN purM purM adk adk kdsB kdsB lpxK lpxK Daro_3257 Daro_3257 queA queA tgt tgt Daro_3288 Daro_3288 Daro_3296 Daro_3296 murA murA Daro_3419 Daro_3419 pyrF pyrF Daro_3478 Daro_3478 Daro_3480 Daro_3480 lpxC lpxC ddl ddl murC murC murG murG ftsW ftsW murD murD mraY mraY murF murF murE murE ftsI ftsI Daro_3530 Daro_3530 murB murB purU purU mrdB mrdB mrdA mrdA pyrE pyrE Daro_0152 Daro_0152 Daro_0153 Daro_0153 Daro_0155 Daro_0155 Daro_0157 Daro_0157 Daro_0158 Daro_0158 Daro_0159 Daro_0159 Daro_0160 Daro_0160 Daro_0161 Daro_0161 Daro_0162 Daro_0162 Daro_0175 Daro_0175 Daro_0177 Daro_0177 Daro_0178 Daro_0178 Daro_0189 Daro_0189 Daro_0190 Daro_0190 Daro_0209 Daro_0209 glmU glmU Daro_0280 Daro_0280 Daro_0291 Daro_0291 Daro_0369 Daro_0369 Daro_0390 Daro_0390 Daro_0422 Daro_0422 purE purE purK purK Daro_0471 Daro_0471 gmhA gmhA pyrC pyrC dcd dcd thyA thyA gpsA gpsA Daro_0667 Daro_0667 murJ murJ Daro_0770 Daro_0770 Daro_0785 Daro_0785 accA accA Daro_0854 Daro_0854 accD accD purF purF lpxH lpxH Daro_0917 Daro_0917 carA carA carB carB ackA ackA Daro_0975 Daro_0975 Daro_1016 Daro_1016 pyrD pyrD Daro_1171 Daro_1171 Daro_1204 Daro_1204 Daro_1239 Daro_1239 Daro_1254 Daro_1254 Daro_1257 Daro_1257 Daro_1258 Daro_1258 Daro_1259 Daro_1259 Daro_1261 Daro_1261 Daro_4195 Daro_4195 Daro_4193 Daro_4193 Daro_4175 Daro_4175 Daro_4173 Daro_4173 Daro_4162 Daro_4162 atpC atpC atpD atpD atpG atpG atpA atpA atpH atpH atpF atpF atpE atpE atpB atpB queE queE queC queC Daro_4018 Daro_4018 mpl mpl Daro_3938 Daro_3938 glmS glmS Daro_3928 Daro_3928 Daro_3927 Daro_3927 uppP uppP mtgA mtgA Daro_3893 Daro_3893 pyrB pyrB Daro_3826 Daro_3826 coaX coaX prs prs coaD coaD coaE coaE purD purD purH purH Daro_3660 Daro_3660 purC purC purT purT Daro_3551 Daro_3551 Daro_3548 Daro_3548 Daro_3547 Daro_3547 Daro_1262 Daro_1262 Daro_1263 Daro_1263 Daro_1264 Daro_1264 Daro_1269 Daro_1269 Daro_1270 Daro_1270 Daro_1272 Daro_1272 Daro_1274 Daro_1274 Daro_1276 Daro_1276 Daro_1278 Daro_1278 Daro_1284 Daro_1284 hldD hldD acsA acsA Daro_1706 Daro_1706 Daro_1736 Daro_1736 Daro_1738 Daro_1738 Daro_1741 Daro_1741 pyrH pyrH lpxD lpxD fabZ fabZ lpxA lpxA lpxB lpxB Daro_1871 Daro_1871 purL purL nagZ nagZ Daro_2098 Daro_2098 ackA-2 ackA-2 tmk tmk mltG mltG Daro_2201 Daro_2201 Daro_2209 Daro_2209 guaA guaA guaB guaB queF queF Daro_3543 Daro_3543 kdsA kdsA pyrG pyrG Daro_2398 Daro_2398 Daro_2404 Daro_2404 Daro_2405 Daro_2405 Daro_2407 Daro_2407 Daro_2409 Daro_2409 Daro_2410 Daro_2410 Daro_2412 Daro_2412 Daro_2414 Daro_2414 Daro_2415 Daro_2415 Daro_2416 Daro_2416 Daro_2427 Daro_2427 Daro_2458 Daro_2458 Daro_2533 Daro_2533 Daro_2708 Daro_2708 Daro_2758 Daro_2758
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_2759Glycosyl transferase, family 2. (362 aa)
Daro_2839Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate. (336 aa)
Daro_2920Conserved hypothetical protein. (1008 aa)
ackA-3Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (772 aa)
purAAdenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (435 aa)
ndkNucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (142 aa)
Daro_3000Conserved hypothetical protein. (540 aa)
Daro_3047FMN adenylyltransferase / riboflavin kinase; Belongs to the ribF family. (306 aa)
queG4Fe-4S cluster binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. (354 aa)
dxs1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. (618 aa)
murIGlutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (269 aa)
dutDeoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. (149 aa)
Daro_3141Phosphopantothenoylcysteine decarboxylase / Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (396 aa)
purNFormyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. (215 aa)
purMPhosphoribosylformylglycinamidine cyclo-ligase. (347 aa)
adkAdenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (217 aa)
kdsB3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (261 aa)
lpxKlipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (333 aa)
Daro_3257Uncharacterized protein conserved in bacteria. (288 aa)
queAQueuosine biosynthesis protein; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (352 aa)
tgttRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] (369 aa)
Daro_3288Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (455 aa)
Daro_3296Lipopolysaccharide heptosyltransferase II. (337 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (417 aa)
Daro_3419HAD-superfamily hydrolase subfamily IIIA:Phosphatase kdsC. (175 aa)
pyrFOrotidine 5'-phosphate decarboxylase subfamily 2; Belongs to the OMP decarboxylase family. Type 2 subfamily. (270 aa)
Daro_3478Conserved hypothetical protein. (506 aa)
Daro_3480Glycosyl transferase, family 2. (336 aa)
lpxCUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. (305 aa)
ddlD-alanine--D-alanine ligase; Cell wall formation. (301 aa)
murCUDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (463 aa)
murGUndecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (352 aa)
ftsWCell division-specific peptidoglycan biosynthesis regulator FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. (387 aa)
murDUDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (450 aa)
mraYPhospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (367 aa)
murFUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (456 aa)
murEUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (492 aa)
ftsIPeptidoglycan synthetase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. (582 aa)
Daro_3530CBS:Transporter-associated region. (282 aa)
murBUDP-N-acetylmuramate dehydrogenase; Cell wall formation. (337 aa)
purUFormyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (289 aa)
mrdBCell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. (370 aa)
mrdACell elongation-specific peptidoglycan D,D-transpeptidase; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. (636 aa)
pyrEOrotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (213 aa)
Daro_0152Lipopolysaccharide heptosyltransferase III, putative. (367 aa)
Daro_0153Glycosyl transferase, group 1. (381 aa)
Daro_0155Glycosyl transferase, group 1. (361 aa)
Daro_0157Glycosyl transferase, family 9. (382 aa)
Daro_0158Glycosyl transferase, group 1. (398 aa)
Daro_0159Glycosyl transferase, family 9. (381 aa)
Daro_0160Glycosyl transferase, group 1. (379 aa)
Daro_0161O-antigen polymerase. (440 aa)
Daro_0162Glycosyl transferase, family 9. (319 aa)
Daro_0175Hypothetical protein. (358 aa)
Daro_0177Acetoacetyl-CoA synthase. (651 aa)
Daro_0178Acyltransferase 3. (369 aa)
Daro_0189Lipid A biosynthesis acyltransferase. (280 aa)
Daro_0190Lipid A biosynthesis acyltransferase. (291 aa)
Daro_0209Penicillin-binding protein 1A. (771 aa)
glmUGlucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the t [...] (452 aa)
Daro_0280NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase. (296 aa)
Daro_0291Penicillin-binding protein 6, Serine peptidase, MEROPS family S11; Belongs to the peptidase S11 family. (391 aa)
Daro_0369Conserved hypothetical protein. (342 aa)
Daro_0390Penicillin-binding protein 1C. (780 aa)
Daro_0422Hypothetical protein. (231 aa)
purE5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (166 aa)
purK5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). (386 aa)
Daro_0471phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase. (555 aa)
gmhAPhosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. (196 aa)
pyrCDihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate. (366 aa)
dcddCTP deaminase; Catalyzes the deamination of dCTP to dUTP. (188 aa)
thyAThymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. (264 aa)
gpsAGlycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (329 aa)
Daro_0667murein-DD-endopeptidase, Serine peptidase, MEROPS family S11; Belongs to the peptidase S11 family. (359 aa)
murJVirulence factor MVIN-like protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. (516 aa)
Daro_0770ATPase FliI/YscN. (472 aa)
Daro_0785TPR repeat. (796 aa)
accAacetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (332 aa)
Daro_08546-pyruvoyl tetrahydropterin synthase and hypothetical protein. (152 aa)
accDacetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (289 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (505 aa)
lpxHUDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (242 aa)
Daro_0917ErfK/YbiS/YcfS/YnhG. (431 aa)
carACarbamoyl-phosphate synthase small subunit; Belongs to the CarA family. (385 aa)
carBCarbamoyl-phosphate synthase large subunit; Belongs to the CarB family. (1068 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (393 aa)
Daro_0975Phosphate butyryltransferase. (472 aa)
Daro_1016Penicillin-binding protein 1A. (778 aa)
pyrDDihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (347 aa)
Daro_1171MltA-interacting MipA. (256 aa)
Daro_1204propionyl-CoA synthetase. (630 aa)
Daro_1239dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (177 aa)
Daro_1254Glycosyl transferase, group 1. (398 aa)
Daro_1257NAD-dependent epimerase/dehydratase:Polysaccharide biosynthesis protein CapD. (365 aa)
Daro_1258dTDP-4-dehydrorhamnose epimerase. (158 aa)
Daro_1259NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase. (310 aa)
Daro_1261Glycosyl transferase, group 1. (402 aa)
Daro_4195Putative outer membrane protein. (282 aa)
Daro_4193Glycosyl transferase, family 2. (252 aa)
Daro_4175Putative lauroyl/myristoyl acyltransferase involved in LPS biosynthesis. (301 aa)
Daro_4173AMP-dependent synthetase and ligase. (458 aa)
Daro_41622-phosphosulfolactate phosphatase; Belongs to the ComB family. (228 aa)
atpCATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (141 aa)
atpDATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (466 aa)
atpGATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (286 aa)
atpAATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (512 aa)
atpHATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (178 aa)
atpFATP synthase F0, subunit B; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (156 aa)
atpEATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (86 aa)
atpBATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (266 aa)
queERadical SAM; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (212 aa)
queCpreQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. (225 aa)
Daro_4018Beta subunit of malonate decarboxylase. (300 aa)
mplUDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily. (448 aa)
Daro_3938acetyl-CoA carboxylase carboxyltransferase subunit alpha; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (452 aa)
glmSGlutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (607 aa)
Daro_3928Lipopolysaccharide heptosyltransferase I. (317 aa)
Daro_3927Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (419 aa)
uppPUndecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (274 aa)
mtgAMonofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (231 aa)
Daro_3893Protein of unknown function DUF179; Belongs to the UPF0301 (AlgH) family. (186 aa)
pyrBAspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (319 aa)
Daro_3826Metallophosphoesterase. (389 aa)
coaXBvg accessory factor; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family. (238 aa)
prsRibose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (316 aa)
coaDPhosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. (164 aa)
coaEDephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (207 aa)
purDPhosphoribosylamine--glycine ligase; Belongs to the GARS family. (425 aa)
purHPhosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. (530 aa)
Daro_3660Aminoglycoside phosphotransferase. (341 aa)
purCSAICAR synthetase. (310 aa)
purTFormate-dependent phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. (399 aa)
Daro_3551Glycosyl transferase, family 39. (547 aa)
Daro_3548Metallophosphoesterase. (267 aa)
Daro_35471,2-diacylglycerol 3-glucosyltransferase. (393 aa)
Daro_1262Glycosyl transferase, group 1. (405 aa)
Daro_1263dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (284 aa)
Daro_1264UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase; NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase. (336 aa)
Daro_1269Colanic acid biosynthesis glycosyl-transferase. (396 aa)
Daro_1270Glycosyl transferase, family 4. (373 aa)
Daro_1272Hypothetical protein. (400 aa)
Daro_1274Glycosyl transferase, group 1. (359 aa)
Daro_1276Glycosyl transferase, group 1. (387 aa)
Daro_1278NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase. (617 aa)
Daro_1284UDP-glucose/GDP-mannose dehydrogenase. (439 aa)
hldDADP-glyceromanno-heptose 6-epimerase precursor; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. (332 aa)
acsAAcetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (654 aa)
Daro_1706NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase. (309 aa)
Daro_1736Phosphoribosyltransferase. (182 aa)
Daro_1738Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage. (256 aa)
Daro_1741dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (320 aa)
pyrHUridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. (238 aa)
lpxDUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (347 aa)
fabZ3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (144 aa)
lpxAacyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (256 aa)
lpxBlipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (382 aa)
Daro_1871Acyltransferase 3. (397 aa)
purLPhosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. (1309 aa)
nagZGlycoside hydrolase, family 3, N-terminal; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. (339 aa)
Daro_2098Phosphate butyryltransferase. (493 aa)
ackA-2Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (403 aa)
tmkThymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. (204 aa)
mltGAminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. (331 aa)
Daro_2201ErfK/YbiS/YcfS/YnhG. (160 aa)
Daro_2209Hypothetical protein. (457 aa)
guaAGMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. (544 aa)
guaBInosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (487 aa)
queFGTP cyclohydrolase I; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). (283 aa)
Daro_3543Glycosyl transferase, group 1. (373 aa)
kdsA2-dehydro-3-deoxyphosphooctonate aldolase; Belongs to the KdsA family. (278 aa)
pyrGCTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (546 aa)
Daro_2398Lipopolysaccharide biosynthesis. (480 aa)
Daro_2404Conserved hypothetical protein. (344 aa)
Daro_2405Glycosyl transferase, group 1. (406 aa)
Daro_2407Glycosyl transferase, group 1. (387 aa)
Daro_2409Glycosyl transferase, group 1. (406 aa)
Daro_2410Glycosyl transferase, group 1. (368 aa)
Daro_2412Conserved hypothetical protein. (444 aa)
Daro_2414Polysaccharide biosynthesis protein. (492 aa)
Daro_2415Conserved hypothetical protein. (287 aa)
Daro_2416Glycosyl transferase, group 1. (391 aa)
Daro_2427Acyltransferase 3. (358 aa)
Daro_2458Lipid A biosynthesis, N-terminal. (96 aa)
Daro_2533Conserved hypothetical protein. (239 aa)
Daro_2708AMP-dependent synthetase and ligase. (576 aa)
Daro_2758Glycosyl transferase, family 39. (534 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
Server load: low (10%) [HD]