(13 nodes) ATP-binding cassette (ABC) transporter complex network (Dechloromonas aromatica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Daro_1197	ABC transporter related protein; Belongs to the ABC transporter superfamily. (359 aa)
	Daro_3080	Permease YjgP/YjgQ. (362 aa)
	Daro_3081	Permease YjgP/YjgQ. (360 aa)
	cysA	Sulphate transport system permease protein 1; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (355 aa)
	cbiN	Cobalt transport protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family. (116 aa)
	Daro_3691	Sulphate transport system permease protein 2:Sulfate ABC transporter, permease protein CysW. (287 aa)
	ftsE	Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (217 aa)
	Daro_4150	ABC transporter related protein. (244 aa)
	Daro_1824	Phosphonate uptake transporter. (518 aa)
	cbiM	Cobalamin (vitamin B12) biosynthesis CbiM protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (225 aa)
	Daro_1694	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (291 aa)
	Daro_1672	Protein of unknown function DUF214. (397 aa)
	Daro_1695	Cobalt transport protein. (246 aa)

Your Current Organism:

Dechloromonas aromatica

NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Daro_1197	cysA	Daro_1197	Daro_3690	ABC transporter related protein; Belongs to the ABC transporter superfamily.	Sulphate transport system permease protein 1; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.	0.449
Daro_1694	Daro_1695	Daro_1694	Daro_1695	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	Cobalt transport protein.	0.999
Daro_1694	cbiM	Daro_1694	Daro_1697	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	Cobalamin (vitamin B12) biosynthesis CbiM protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	0.999
Daro_1694	cbiN	Daro_1694	Daro_1696	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	Cobalt transport protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.	0.995
Daro_1695	Daro_1694	Daro_1695	Daro_1694	Cobalt transport protein.	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	0.999
Daro_1695	cbiM	Daro_1695	Daro_1697	Cobalt transport protein.	Cobalamin (vitamin B12) biosynthesis CbiM protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	0.999
Daro_1695	cbiN	Daro_1695	Daro_1696	Cobalt transport protein.	Cobalt transport protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.	0.996
Daro_3080	Daro_3081	Daro_3080	Daro_3081	Permease YjgP/YjgQ.	Permease YjgP/YjgQ.	0.999
Daro_3080	Daro_4150	Daro_3080	Daro_4150	Permease YjgP/YjgQ.	ABC transporter related protein.	0.993
Daro_3081	Daro_3080	Daro_3081	Daro_3080	Permease YjgP/YjgQ.	Permease YjgP/YjgQ.	0.999
Daro_3081	Daro_4150	Daro_3081	Daro_4150	Permease YjgP/YjgQ.	ABC transporter related protein.	0.985
Daro_3691	cysA	Daro_3691	Daro_3690	Sulphate transport system permease protein 2:Sulfate ABC transporter, permease protein CysW.	Sulphate transport system permease protein 1; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.	0.999
Daro_4150	Daro_3080	Daro_4150	Daro_3080	ABC transporter related protein.	Permease YjgP/YjgQ.	0.993
Daro_4150	Daro_3081	Daro_4150	Daro_3081	ABC transporter related protein.	Permease YjgP/YjgQ.	0.985
cbiM	Daro_1694	Daro_1697	Daro_1694	Cobalamin (vitamin B12) biosynthesis CbiM protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	0.999
cbiM	Daro_1695	Daro_1697	Daro_1695	Cobalamin (vitamin B12) biosynthesis CbiM protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	Cobalt transport protein.	0.999
cbiM	cbiN	Daro_1697	Daro_1696	Cobalamin (vitamin B12) biosynthesis CbiM protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	Cobalt transport protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.	0.996
cbiN	Daro_1694	Daro_1696	Daro_1694	Cobalt transport protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	0.995
cbiN	Daro_1695	Daro_1696	Daro_1695	Cobalt transport protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.	Cobalt transport protein.	0.996
cbiN	cbiM	Daro_1696	Daro_1697	Cobalt transport protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.	Cobalamin (vitamin B12) biosynthesis CbiM protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	0.996