STRINGSTRING
Daro_2953 Daro_2953 Daro_2952 Daro_2952 Daro_2789 Daro_2789 Daro_2785 Daro_2785 Daro_1834 Daro_1834 Daro_1684 Daro_1684 Daro_1055 Daro_1055 Daro_1044 Daro_1044 Daro_0132 Daro_0132 Daro_4090 Daro_4090 Daro_4088 Daro_4088 Daro_4030 Daro_4030 Daro_4029 Daro_4029 Daro_3944 Daro_3944 Daro_3157 Daro_3157 Daro_1028 Daro_1028
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_2953TonB-dependent receptor. (700 aa)
Daro_2952TonB-dependent receptor. (645 aa)
Daro_2789TonB-dependent receptor. (675 aa)
Daro_2785TonB-dependent receptor. (710 aa)
Daro_1834TonB-dependent siderophore receptor. (787 aa)
Daro_1684TonB-dependent receptor. (717 aa)
Daro_1055TonB-dependent siderophore receptor. (720 aa)
Daro_1044TonB-dependent receptor:TonB box, N-terminal. (726 aa)
Daro_0132TonB-dependent receptor. (679 aa)
Daro_4090TonB-dependent receptor. (705 aa)
Daro_4088TonB-dependent receptor. (750 aa)
Daro_4030TonB-dependent receptor:Lipocalin. (713 aa)
Daro_4029TonB-dependent receptor. (719 aa)
Daro_3944TonB-dependent receptor. (689 aa)
Daro_3157TonB-dependent receptor. (714 aa)
Daro_1028TonB-dependent receptor. (769 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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