STRINGSTRING
Daro_1669 Daro_1669 Daro_1644 Daro_1644 Daro_1537 Daro_1537 Daro_1530 Daro_1530 Daro_1528 Daro_1528 Daro_1525 Daro_1525 Daro_1477 Daro_1477 Daro_3135 Daro_3135 Daro_3198 Daro_3198 Daro_3267 Daro_3267 Daro_3322 Daro_3322 Daro_3580 Daro_3580 Daro_3638 Daro_3638 Daro_3649 Daro_3649 Daro_1047 Daro_1047 Daro_1063 Daro_1063 Daro_1089 Daro_1089 Daro_1136 Daro_1136 Daro_1294 Daro_1294 Daro_1295 Daro_1295 Daro_1332 Daro_1332 Daro_1392 Daro_1392 Daro_3790 Daro_3790 Daro_3799 Daro_3799 Daro_3831 Daro_3831 Daro_3834 Daro_3834 Daro_3915 Daro_3915 Daro_3955 Daro_3955 Daro_4007 Daro_4007 Daro_4024 Daro_4024 ruvB ruvB Daro_4077 Daro_4077 Daro_4080 Daro_4080 Daro_0668 Daro_0668 Daro_0610 Daro_0610 Daro_0552 Daro_0552 Daro_0512 Daro_0512 Daro_0476 Daro_0476 Daro_0401 Daro_0401 Daro_0384 Daro_0384 Daro_0017 Daro_0017 Daro_0219 Daro_0219 Daro_0248 Daro_0248 Daro_0292 Daro_0292 Daro_0357 Daro_0357 Daro_1036 Daro_1036 fur fur hrcA hrcA Daro_4089 Daro_4089 Daro_0898 Daro_0898 Daro_0897 Daro_0897 Daro_0804 Daro_0804 Daro_0698 Daro_0698 Daro_0694 Daro_0694 Daro_0687 Daro_0687 Daro_2213 Daro_2213 Daro_2281 Daro_2281 Daro_2456 Daro_2456 Daro_2469 Daro_2469 Daro_2495 Daro_2495 Daro_2641 Daro_2641 Daro_2792 Daro_2792 Daro_2809 Daro_2809 Daro_2866 Daro_2866 Daro_2910 Daro_2910 Daro_2918 Daro_2918 Daro_3100 Daro_3100 Daro_2135 Daro_2135 Daro_2129 Daro_2129 Daro_2110 Daro_2110 Daro_2043 Daro_2043 Daro_1985 Daro_1985 Daro_1948 Daro_1948 lexA lexA Daro_1932 Daro_1932 Daro_1810 Daro_1810 Daro_1767 Daro_1767
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_1669Transcriptional regulator, Crp/Fnr family. (233 aa)
Daro_1644Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family. (302 aa)
Daro_1537Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (307 aa)
Daro_1530O-methyltransferase, family 2. (345 aa)
Daro_1528Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (298 aa)
Daro_1525Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (313 aa)
Daro_1477Molybdenum-binding protein, N-terminal:Molybdenum-pterin binding protein. (272 aa)
Daro_3135Transcriptional regulator, ArsR family. (106 aa)
Daro_3198Transcriptional regulator, Crp/Fnr family. (231 aa)
Daro_3267Transcriptional regulator, AsnC family. (158 aa)
Daro_3322Cyclic nucleotide-binding protein. (495 aa)
Daro_3580Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (294 aa)
Daro_3638Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (316 aa)
Daro_3649Cyclic nucleotide-binding:Bacterial regulatory protein, Crp. (222 aa)
Daro_1047Cyclic nucleotide-binding:Bacterial regulatory protein, Crp. (247 aa)
Daro_1063Transcriptional regulator, GntR family. (470 aa)
Daro_1089Transcriptional regulator, Crp/Fnr family. (218 aa)
Daro_1136Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (306 aa)
Daro_1294Cyclic nucleotide-binding:Bacterial regulatory protein, Crp. (220 aa)
Daro_1295DNA translocase FtsK. (768 aa)
Daro_1332Conserved hypothetical protein. (178 aa)
Daro_1392Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (303 aa)
Daro_3790Transcriptional regulator, GntR family. (235 aa)
Daro_3799Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (300 aa)
Daro_3831Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (335 aa)
Daro_3834Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (295 aa)
Daro_3915Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (301 aa)
Daro_3955Filamentation induced by cAMP protein Fic. (384 aa)
Daro_4007Transcriptional regulator, GntR family. (233 aa)
Daro_4024Transcriptional regulator, GntR family. (239 aa)
ruvBHolliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (358 aa)
Daro_4077Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (291 aa)
Daro_4080Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (327 aa)
Daro_0668Transcriptional regulator, IclR family. (242 aa)
Daro_0610Transcriptional regulator, ArsR family. (98 aa)
Daro_0552Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (303 aa)
Daro_0512Transcriptional regulator, AsnC family. (158 aa)
Daro_0476Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (319 aa)
Daro_0401Regulatory protein, ArsR. (103 aa)
Daro_0384Transcriptional regulator, IclR family. (265 aa)
Daro_0017Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (304 aa)
Daro_0219Hypothetical protein. (244 aa)
Daro_0248Cyclic nucleotide-binding protein. (224 aa)
Daro_0292Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (302 aa)
Daro_0357Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (286 aa)
Daro_1036Cyclic nucleotide-binding protein. (245 aa)
furFerric uptake regulator, Fur family; Belongs to the Fur family. (147 aa)
hrcAHeat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (342 aa)
Daro_4089Hypothetical protein. (191 aa)
Daro_0898Transcriptional regulator, GntR family. (216 aa)
Daro_0897Regulatory protein, IclR. (278 aa)
Daro_0804Regulatory protein, IclR. (266 aa)
Daro_0698Transcriptional regulator, ArsR family. (111 aa)
Daro_0694Regulatory protein, MarR. (171 aa)
Daro_0687Transcriptional regulator, ArsR family. (136 aa)
Daro_2213Hypothetical protein. (372 aa)
Daro_2281Transcriptional regulator, ArsR family. (116 aa)
Daro_2456Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (178 aa)
Daro_2469Protein of unknown function DUF480; Belongs to the UPF0502 family. (213 aa)
Daro_2495Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family. (292 aa)
Daro_2641Transcriptional regulator, ArsR family. (112 aa)
Daro_2792Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (295 aa)
Daro_2809Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (315 aa)
Daro_2866Transcriptional regulator, GntR family. (251 aa)
Daro_2910Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (313 aa)
Daro_2918Transcriptional regulator, BadM/Rrf2 family. (159 aa)
Daro_3100Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (300 aa)
Daro_2135Transcriptional regulator, ArsR family. (97 aa)
Daro_2129Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family. (311 aa)
Daro_2110Regulatory protein, MarR. (163 aa)
Daro_2043Cyclic nucleotide-binding protein. (439 aa)
Daro_1985Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family. (300 aa)
Daro_1948Transcriptional regulator, BadM/Rrf2 family. (167 aa)
lexASOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (201 aa)
Daro_1932Transcriptional regulator, GntR family. (476 aa)
Daro_1810Selenocysteine-specific translation elongation factor SelB. (627 aa)
Daro_1767Transcriptional regulator, GntR family. (255 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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