STRINGSTRING
Daro_3676 Daro_3676 Daro_0523 Daro_0523 pgi pgi Daro_0626 Daro_0626 Daro_0630 Daro_0630 Daro_0759 Daro_0759 Daro_0784 Daro_0784 Daro_0849 Daro_0849 Daro_0852 Daro_0852 Daro_0990 Daro_0990 Daro_1045 Daro_1045 serS serS Daro_1444 Daro_1444 sbcD sbcD Daro_2238 Daro_2238 Daro_2406 Daro_2406 Daro_2561 Daro_2561 Daro_2872 Daro_2872 Daro_2905 Daro_2905 alaS alaS Daro_3457 Daro_3457 Daro_3469 Daro_3469 Daro_3474 Daro_3474
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_3676Alanyl aminopeptidase, Metallo peptidase, MEROPS family M01. (868 aa)
Daro_0523Catalase, N-terminal; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. (332 aa)
pgiGlucose-6-phosphate isomerase. (526 aa)
Daro_0626Porphobilinogen synthase; Belongs to the ALAD family. (334 aa)
Daro_0630Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family. (138 aa)
Daro_0759Flagellin, N-terminal. (326 aa)
Daro_0784Flagellin, C-terminal:Flagellin, N-terminal; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (273 aa)
Daro_0849Conserved hypothetical protein. (85 aa)
Daro_0852Protein of unknown function UPF0005; Belongs to the BI1 family. (230 aa)
Daro_0990Peptidylprolyl isomerase, FKBP-type. (135 aa)
Daro_1045Conserved hypothetical protein. (416 aa)
serSseryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (427 aa)
Daro_1444Phosphoglucomutase, alpha-D-glucose phosphate-specific. (545 aa)
sbcDExodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (414 aa)
Daro_2238DNA repair exonuclease-like protein. (436 aa)
Daro_2406Conserved hypothetical protein. (505 aa)
Daro_2561DNA repair exonuclease-like protein. (445 aa)
Daro_2872Hypothetical protein. (398 aa)
Daro_2905Transcriptional regulator, BolA protein family; Belongs to the BolA/IbaG family. (88 aa)
alaSalanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (871 aa)
Daro_3457Hypothetical protein. (415 aa)
Daro_3469Peptidylprolyl isomerase, FKBP-type. (114 aa)
Daro_3474Porin, Gram-negative type. (384 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.