17 items (Dechloromonas aromatica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Daro_4184	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (377 aa)
	Daro_4097	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (379 aa)
	Daro_0524	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (382 aa)
	Daro_2357	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (389 aa)
	Daro_2712	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (405 aa)
	Daro_2772	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (390 aa)
	Daro_1443	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (420 aa)
	Daro_0376	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (381 aa)
	Daro_3540	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (377 aa)
	Daro_4043	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (388 aa)
	Daro_4096	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (379 aa)
	Daro_0900	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (379 aa)
	Daro_0904	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (377 aa)
	Daro_0920	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (382 aa)
	Daro_1440	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (398 aa)
	Daro_2947	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (367 aa)
	Daro_0921	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (382 aa)

Your Current Organism:

Dechloromonas aromatica

NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Daro_0524	Daro_4184	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	0.441
Daro_0904	Daro_4184	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	0.451
Daro_0920	Daro_0921	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	0.464
Daro_0921	Daro_0920	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	0.464
Daro_1440	Daro_2947	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	0.661
Daro_2947	Daro_1440	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	0.661
Daro_4096	Daro_4097	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	0.554
Daro_4097	Daro_4096	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	0.554
Daro_4184	Daro_0524	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	0.441
Daro_4184	Daro_0904	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.	0.451