STRINGSTRING
Daro_0738 Daro_0738 Daro_0937 Daro_0937 Daro_3895 Daro_3895 Daro_3459 Daro_3459 Daro_0726 Daro_0726 Daro_0657 Daro_0657 Daro_3006 Daro_3006 Daro_3350 Daro_3350 Daro_0008 Daro_0008 Daro_0040 Daro_0040 Daro_0223 Daro_0223 Daro_0240 Daro_0240 Daro_1142 Daro_1142 Daro_2901 Daro_2901 Daro_2890 Daro_2890 Daro_2787 Daro_2787
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_0738Two-component system, chemotaxis family, sensor kinase CheA; CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt. (639 aa)
Daro_0937Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Hpt. (852 aa)
Daro_3895Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt. (1866 aa)
Daro_3459Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt. (1055 aa)
Daro_0726Two-component system, chemotaxis family, sensor kinase CheA; CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt. (784 aa)
Daro_0657Metal-dependent phosphohydrolase, HD subdomain:Hpt. (367 aa)
Daro_3006PAS protein. (1560 aa)
Daro_3350Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt. (923 aa)
Daro_0008PAS protein. (1439 aa)
Daro_0040PAS/PAC sensor hybrid histidine kinase. (1193 aa)
Daro_0223PAS protein. (1214 aa)
Daro_0240Hpt sensor hybrid histidine kinase. (1005 aa)
Daro_1142Two-component system, chemotaxis family, sensor kinase CheA; CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt. (741 aa)
Daro_2901Hpt. (112 aa)
Daro_2890Peptidase M52, hydrogen uptake protein. (1053 aa)
Daro_2787Hpt sensor hybrid histidine kinase. (909 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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