STRINGSTRING
Daro_0470 Daro_0470 Daro_0424 Daro_0424 Daro_0411 Daro_0411 Daro_0230 Daro_0230 Daro_0133 Daro_0133 Daro_0058 Daro_0058 Daro_4048 Daro_4048 Daro_3990 Daro_3990 Daro_3975 Daro_3975 Daro_3954 Daro_3954 Daro_3868 Daro_3868 Daro_3770 Daro_3770 Daro_3750 Daro_3750 Daro_3743 Daro_3743 Daro_3734 Daro_3734 Daro_3695 Daro_3695 Daro_3688 Daro_3688 Daro_3623 Daro_3623 Daro_3621 Daro_3621 Daro_3588 Daro_3588 Daro_3508 Daro_3508 Daro_3445 Daro_3445 Daro_3354 Daro_3354 Daro_3341 Daro_3341 Daro_3099 Daro_3099 Daro_3052 Daro_3052 Daro_3048 Daro_3048 Daro_2966 Daro_2966 Daro_2880 Daro_2880 Daro_2841 Daro_2841 Daro_2825 Daro_2825 Daro_2788 Daro_2788 Daro_2293 Daro_2293 Daro_2220 Daro_2220 Daro_2048 Daro_2048 Daro_1988 Daro_1988 Daro_1976 Daro_1976 Daro_1909 Daro_1909 Daro_1771 Daro_1771 Daro_1676 Daro_1676 Daro_1665 Daro_1665 Daro_1662 Daro_1662 Daro_1597 Daro_1597 Daro_1579 Daro_1579 Daro_1542 Daro_1542 Daro_1362 Daro_1362 Daro_1203 Daro_1203 Daro_1156 Daro_1156 Daro_1052 Daro_1052 Daro_0972 Daro_0972 Daro_0787 Daro_0787 Daro_0709 Daro_0709 Daro_0675 Daro_0675 Daro_0505 Daro_0505
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_0470GGDEF protein. (412 aa)
Daro_0424PAS:GGDEF protein. (715 aa)
Daro_0411PAS:GGDEF protein. (317 aa)
Daro_0230GGDEF protein. (355 aa)
Daro_0133Diguanylate cyclase/phosphodiesterase. (694 aa)
Daro_0058Diguanylate cyclase/phosphodiesterase. (783 aa)
Daro_4048Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (739 aa)
Daro_3990Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1665 aa)
Daro_3975GGDEF protein. (523 aa)
Daro_3954PAS:GGDEF:Hemerythrin HHE cation binding region. (667 aa)
Daro_3868Diguanylate cyclase. (517 aa)
Daro_3770PAS:GGDEF protein. (328 aa)
Daro_3750PAS:GGDEF protein. (721 aa)
Daro_3743Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (722 aa)
Daro_3734Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (582 aa)
Daro_3695Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (930 aa)
Daro_3688Response regulator receiver modulated diguanylate cyclase. (543 aa)
Daro_3623Diguanylate cyclase with PAS/PAC sensor. (583 aa)
Daro_3621GGDEF protein. (413 aa)
Daro_3588Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (827 aa)
Daro_3508Diguanylate cyclase. (638 aa)
Daro_3445Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1094 aa)
Daro_3354Diguanylate cyclase/phosphodiesterase. (637 aa)
Daro_3341Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (655 aa)
Daro_3099Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1038 aa)
Daro_3052GGDEF protein. (523 aa)
Daro_3048Diguanylate cyclase. (346 aa)
Daro_2966GGDEF protein. (378 aa)
Daro_2880GGDEF protein. (410 aa)
Daro_2841Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (714 aa)
Daro_2825PAS:GGDEF protein. (548 aa)
Daro_2788Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. (715 aa)
Daro_2293GGDEF protein. (269 aa)
Daro_2220GGDEF protein. (226 aa)
Daro_2048Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (827 aa)
Daro_1988Diguanylate cyclase/phosphodiesterase. (695 aa)
Daro_1976PAS:GGDEF protein. (963 aa)
Daro_1909Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (832 aa)
Daro_1771PAS:GGDEF protein. (449 aa)
Daro_1676Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (996 aa)
Daro_1665Response regulator receiver modulated diguanylate cyclase. (313 aa)
Daro_1662Diguanylate cyclase with PAS/PAC sensor. (820 aa)
Daro_1597Response regulator receiver modulated diguanylate cyclase. (313 aa)
Daro_1579Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1093 aa)
Daro_1542Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1006 aa)
Daro_1362Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (862 aa)
Daro_1203Response regulator receiver modulated diguanylate cyclase. (373 aa)
Daro_1156Diguanylate cyclase with PAS/PAC sensor. (469 aa)
Daro_1052Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (585 aa)
Daro_0972Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (994 aa)
Daro_0787GGDEF protein. (585 aa)
Daro_0709Response regulator receiver modulated diguanylate cyclase. (322 aa)
Daro_0675Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (925 aa)
Daro_0505Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (952 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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