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murB murB glmU glmU Daro_0279 Daro_0279 Daro_0368 Daro_0368 pgi pgi glgC glgC glk glk glmM glmM Daro_1226 Daro_1226 Daro_1236 Daro_1236 Daro_1246 Daro_1246 Daro_1255 Daro_1255 Daro_1256 Daro_1256 Daro_1257 Daro_1257 Daro_1259 Daro_1259 Daro_1264 Daro_1264 Daro_1265 Daro_1265 Daro_1284 Daro_1284 Daro_1444 Daro_1444 Daro_1735 Daro_1735 nagZ nagZ Daro_2389 Daro_2389 Daro_2402 Daro_2402 Daro_2440 Daro_2440 Daro_2852 Daro_2852 Daro_3237 Daro_3237 Daro_3299 Daro_3299 murA murA Daro_3660 Daro_3660 Daro_3661 Daro_3661 Daro_3930 Daro_3930 glmS glmS Daro_4082 Daro_4082
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
murBUDP-N-acetylmuramate dehydrogenase; Cell wall formation. (337 aa)
glmUGlucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the t [...] (452 aa)
Daro_0279Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region. (336 aa)
Daro_0368Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region. (349 aa)
pgiGlucose-6-phosphate isomerase. (526 aa)
glgCGlucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (440 aa)
glkGlucokinase; Belongs to the bacterial glucokinase family. (309 aa)
glmMPhosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (450 aa)
Daro_12262-phosphoglycolate phosphatase, prokaryotic:HAD-superfamily hydrolase, subfamily IA, variant 1. (222 aa)
Daro_1236UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (334 aa)
Daro_1246Surface polysaccharide biosynthesis protein, transferase. (359 aa)
Daro_1255NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase. (325 aa)
Daro_1256Nucleotidyl transferase. (257 aa)
Daro_1257NAD-dependent epimerase/dehydratase:Polysaccharide biosynthesis protein CapD. (365 aa)
Daro_1259NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase. (310 aa)
Daro_1264UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase; NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase. (336 aa)
Daro_1265UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (372 aa)
Daro_1284UDP-glucose/GDP-mannose dehydrogenase. (439 aa)
Daro_1444Phosphoglucomutase, alpha-D-glucose phosphate-specific. (545 aa)
Daro_1735UDP-glucose pyrophosphorylase. (289 aa)
nagZGlycoside hydrolase, family 3, N-terminal; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. (339 aa)
Daro_2389Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). (479 aa)
Daro_2402UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (390 aa)
Daro_2440UDP-glucose/GDP-mannose dehydrogenase:6-phosphogluconate dehydrogenase, NAD-binding protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (426 aa)
Daro_2852Hypothetical protein. (335 aa)
Daro_3237Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region. (333 aa)
Daro_3299Phosphomannomutase. (458 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (417 aa)
Daro_3660Aminoglycoside phosphotransferase. (341 aa)
Daro_3661Nucleotidyl transferase. (223 aa)
Daro_3930UDP-glucuronate 4-epimerase; NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase:Nucleotide sugar epimerase. (335 aa)
glmSGlutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (607 aa)
Daro_4082PTS system fructose subfamily IIA component. (129 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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