(20 nodes) Peptidoglycan biosynthesis network (Dechloromonas aromatica)

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second shell of interactors

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proteins of unknown 3D structure

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Your Input:
	murB	UDP-N-acetylmuramate dehydrogenase; Cell wall formation. (337 aa)
	mrdA	Cell elongation-specific peptidoglycan D,D-transpeptidase; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. (636 aa)
	Daro_0209	Penicillin-binding protein 1A. (771 aa)
	Daro_0291	Penicillin-binding protein 6, Serine peptidase, MEROPS family S11; Belongs to the peptidase S11 family. (391 aa)
	Daro_0390	Penicillin-binding protein 1C. (780 aa)
	Daro_0423	D-Ala-D-Ala carboxypeptidase PBP3, Serine peptidase, MEROPS family S13. (479 aa)
	Daro_1016	Penicillin-binding protein 1A. (778 aa)
	Daro_1746	Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (253 aa)
	Daro_2302	Undecaprenyl-diphosphatase. (198 aa)
	murA	UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (417 aa)
	ddl	D-alanine--D-alanine ligase; Cell wall formation. (301 aa)
	murC	UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (463 aa)
	murG	Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (352 aa)
	murD	UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (450 aa)
	mraY	Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (367 aa)
	murF	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (456 aa)
	murE	UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (492 aa)
	ftsI	Peptidoglycan synthetase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. (582 aa)
	mtgA	Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (231 aa)
	uppP	Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (274 aa)

Your Current Organism:

Dechloromonas aromatica

NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Daro_0209	Daro_0291	Daro_0209	Daro_0291	Penicillin-binding protein 1A.	Penicillin-binding protein 6, Serine peptidase, MEROPS family S11; Belongs to the peptidase S11 family.	0.910
Daro_0209	Daro_0390	Daro_0209	Daro_0390	Penicillin-binding protein 1A.	Penicillin-binding protein 1C.	0.923
Daro_0209	Daro_1016	Daro_0209	Daro_1016	Penicillin-binding protein 1A.	Penicillin-binding protein 1A.	0.904
Daro_0209	ddl	Daro_0209	Daro_3496	Penicillin-binding protein 1A.	D-alanine--D-alanine ligase; Cell wall formation.	0.436
Daro_0209	ftsI	Daro_0209	Daro_3504	Penicillin-binding protein 1A.	Peptidoglycan synthetase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily.	0.727
Daro_0209	mraY	Daro_0209	Daro_3501	Penicillin-binding protein 1A.	Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.	0.519
Daro_0209	mrdA	Daro_0209	Daro_0113	Penicillin-binding protein 1A.	Cell elongation-specific peptidoglycan D,D-transpeptidase; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.	0.732
Daro_0209	mtgA	Daro_0209	Daro_3906	Penicillin-binding protein 1A.	Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.	0.418
Daro_0209	murA	Daro_0209	Daro_3393	Penicillin-binding protein 1A.	UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.	0.671
Daro_0209	murC	Daro_0209	Daro_3497	Penicillin-binding protein 1A.	UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.	0.678
Daro_0209	murD	Daro_0209	Daro_3500	Penicillin-binding protein 1A.	UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.	0.443
Daro_0209	murE	Daro_0209	Daro_3503	Penicillin-binding protein 1A.	UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.	0.450
Daro_0209	murF	Daro_0209	Daro_3502	Penicillin-binding protein 1A.	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.	0.646
Daro_0209	murG	Daro_0209	Daro_3498	Penicillin-binding protein 1A.	Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.	0.482
Daro_0291	Daro_0209	Daro_0291	Daro_0209	Penicillin-binding protein 6, Serine peptidase, MEROPS family S11; Belongs to the peptidase S11 family.	Penicillin-binding protein 1A.	0.910
Daro_0291	Daro_0423	Daro_0291	Daro_0423	Penicillin-binding protein 6, Serine peptidase, MEROPS family S11; Belongs to the peptidase S11 family.	D-Ala-D-Ala carboxypeptidase PBP3, Serine peptidase, MEROPS family S13.	0.918
Daro_0291	Daro_1016	Daro_0291	Daro_1016	Penicillin-binding protein 6, Serine peptidase, MEROPS family S11; Belongs to the peptidase S11 family.	Penicillin-binding protein 1A.	0.910
Daro_0390	Daro_0209	Daro_0390	Daro_0209	Penicillin-binding protein 1C.	Penicillin-binding protein 1A.	0.923
Daro_0390	Daro_1016	Daro_0390	Daro_1016	Penicillin-binding protein 1C.	Penicillin-binding protein 1A.	0.923
Daro_0423	Daro_0291	Daro_0423	Daro_0291	D-Ala-D-Ala carboxypeptidase PBP3, Serine peptidase, MEROPS family S13.	Penicillin-binding protein 6, Serine peptidase, MEROPS family S11; Belongs to the peptidase S11 family.	0.918