STRINGSTRING
KHD21783.1 KHD21783.1 KHD20311.1 KHD20311.1 KHD20407.1 KHD20407.1 KHD20691.1 KHD20691.1 KHD20671.1 KHD20671.1 ubiC ubiC KHD20994.1 KHD20994.1 ubiA ubiA KHD20852.1 KHD20852.1 KHD21130.1 KHD21130.1 KHD21004.1 KHD21004.1 KHD21409.1 KHD21409.1 KHD21635.1 KHD21635.1 KHD21912.1 KHD21912.1 mnmC mnmC KHD22413.1 KHD22413.1 ubiG ubiG KHD22355.1 KHD22355.1 ubiD ubiD KHD22210.1 KHD22210.1 KHD22965.1 KHD22965.1 KHD22959.1 KHD22959.1 KHD17385.1 KHD17385.1 KHD17473.1 KHD17473.1 KHD17712.1 KHD17712.1 KHD17822.1 KHD17822.1 KHD17801.1 KHD17801.1 KHD17924.1 KHD17924.1 KHD17917.1 KHD17917.1 KHD18079.1 KHD18079.1 KHD18153.1 KHD18153.1 KHD18131.1 KHD18131.1 KHD18312.1 KHD18312.1 ubiE ubiE coq7 coq7 KHD18716.1 KHD18716.1 KHD18905.1 KHD18905.1 ubiX-3 ubiX-3 KHD18962.1 KHD18962.1 KHD19173.1 KHD19173.1 KHD19176.1 KHD19176.1 KHD19435.1 KHD19435.1 KHD19672.1 KHD19672.1 KHD19815.1 KHD19815.1 KHD19814.1 KHD19814.1 KHD19813.1 KHD19813.1 KHD19807.1 KHD19807.1 KHD19806.1 KHD19806.1 KHD19803.1 KHD19803.1 KHD19799.1 KHD19799.1 KHD19795.1 KHD19795.1 KHD19776.1 KHD19776.1 KHD19775.1 KHD19775.1 KHD19766.1 KHD19766.1 KHD19973.1 KHD19973.1 KHD20113.1 KHD20113.1 KHD20320.1 KHD20320.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KHD21783.1Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
KHD20311.1NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
KHD20407.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)
KHD20691.1Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
KHD20671.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
ubiCChorismate--pyruvate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. (227 aa)
KHD20994.1Ubiquinone biosynthesis protein UbiH; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
ubiA4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. (288 aa)
KHD20852.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)
KHD21130.1Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
KHD21004.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)
KHD21409.14-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
KHD21635.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
KHD21912.1Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
mnmCFAD-dependent cmnm(5)s(2)U34 oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. (683 aa)
KHD22413.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
ubiG3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. (232 aa)
KHD22355.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
ubiD3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis. (529 aa)
KHD22210.14-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
KHD22965.1Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
KHD22959.14-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
KHD17385.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
KHD17473.14-hydroxyphenylpyruvate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
KHD17712.1NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
KHD17822.1NAD(P)H:quinone oxidoreductase; Catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa)
KHD17801.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
KHD17924.14-hydroxyphenylpyruvate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
KHD17917.1NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
KHD18079.1Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
KHD18153.1NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WrbA family. (202 aa)
KHD18131.1Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
KHD18312.1Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
ubiEUbiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (243 aa)
coq72-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. (224 aa)
KHD18716.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
KHD18905.1Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
ubiX-33-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (196 aa)
KHD18962.1Ubiquinone biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
KHD19173.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
KHD19176.1Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
KHD19435.1Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)
KHD19672.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)
KHD19815.1Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)
KHD19814.1Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
KHD19813.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
KHD19807.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
KHD19806.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
KHD19803.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
KHD19799.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
KHD19795.1NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
KHD19776.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
KHD19775.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
KHD19766.1Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)
KHD19973.13-demethylubiquinone-9 3-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
KHD20113.1Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
KHD20320.1Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
Your Current Organism:
Paraburkholderia sacchari
NCBI taxonomy Id: 159450
Other names: Burkholderia sacchari, Burkholderia sacchari Bramer et al. 2001, CCT 6771, CCUG 46043, CIP 107211, DSM 17165, IPT 101, LMG 19450, LMG:19450, P. sacchari, Paraburkholderia sacchari (Braner et al. 2001) Sawana et al. 2015
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