(49 nodes) Streptomycin biosynthesis network (Enterococcus pallens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OJG78304.1	Hypothetical protein. (264 aa)
	OJG81986.1	Hypothetical protein. (288 aa)
	OJG82064.1	Hypothetical protein. (294 aa)
	OJG82087.1	Hypothetical protein. (273 aa)
	OJG82116.1	Hypothetical protein. (297 aa)
	OJG78016.1	Hypothetical protein. (290 aa)
	OJG78050.1	Hypothetical protein. (290 aa)
	OJG77780.1	Hypothetical protein. (284 aa)
	OJG77748.1	Hypothetical protein. (327 aa)
	OJG77753.1	Hypothetical protein. (263 aa)
	OJG77249.1	Hypothetical protein. (258 aa)
	OJG81429.1	Hypothetical protein. (305 aa)
	OJG81437.1	Hypothetical protein. (354 aa)
	OJG81498.1	Hypothetical protein. (289 aa)
	OJG77155.1	Phosphosugar-binding transcriptional regulator. (308 aa)
	OJG77043.1	RpiR family phosphosugar-binding transcriptional regulator. (272 aa)
	OJG76800.1	Hypothetical protein. (252 aa)
	OJG76713.1	RpiR family transcriptional regulator. (251 aa)
	OJG76645.1	Hypothetical protein. (349 aa)
	OJG82358.1	Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (290 aa)
	OJG82359.1	dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (193 aa)
	OJG82360.1	dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (342 aa)
	OJG82361.1	dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (279 aa)
	OJG82457.1	Glucokinase. (317 aa)
	OJG79646.1	Hypothetical protein. (250 aa)
	OJG79748.1	Hypothetical protein. (290 aa)
	OJG79750.1	Hypothetical protein. (264 aa)
	OJG79504.1	Hypothetical protein. (296 aa)
	OJG79554.1	Hypothetical protein. (255 aa)
	OJG79576.1	Hypothetical protein. (300 aa)
	OJG79184.1	Hypothetical protein. (255 aa)
	OJG78977.1	Hypothetical protein. (234 aa)
	OJG78553.1	Hypothetical protein. (234 aa)
	OJG78613.1	Hypothetical protein. (281 aa)
	OJG78457.1	Hypothetical protein. (342 aa)
	OJG78458.1	Hypothetical protein. (269 aa)
	OJG78474.1	Hypothetical protein. (259 aa)
	OJG78475.1	Hypothetical protein. (236 aa)
	OJG79883.1	Hypothetical protein. (341 aa)
	OJG73051.1	Hypothetical protein. (248 aa)
	OJG80471.1	Hypothetical protein. (277 aa)
	OJG80656.1	Hypothetical protein. (260 aa)
	OJG80613.1	Hypothetical protein. (283 aa)
	OJG76047.1	Hypothetical protein. (245 aa)
	OJG81317.1	Phosphoglucomutase/phosphomannomutase. (577 aa)
	OJG76169.1	RpiR family phosphosugar-binding transcriptional regulator. (305 aa)
	OJG76135.1	Hypothetical protein. (300 aa)
	OJG80005.1	Hypothetical protein. (358 aa)
	OJG79988.1	Hypothetical protein. (326 aa)

Your Current Organism:

Enterococcus pallens

NCBI taxonomy Id: 160454
Other names: ATCC BAA-351, CCUG 45554, E. pallens, Enterococcus pallens Tyrrell et al. 2002, NBRC 100697, strain PQ2

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OJG73051.1	OJG81317.1	RV10_GL004887	RV10_GL003445	Hypothetical protein.	Phosphoglucomutase/phosphomannomutase.	0.736
OJG73051.1	OJG82359.1	RV10_GL004887	RV10_GL000180	Hypothetical protein.	dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.	0.895
OJG73051.1	OJG82360.1	RV10_GL004887	RV10_GL000181	Hypothetical protein.	dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.	0.909
OJG73051.1	OJG82361.1	RV10_GL004887	RV10_GL000182	Hypothetical protein.	dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.	0.770
OJG76047.1	OJG81317.1	RV10_GL004294	RV10_GL003445	Hypothetical protein.	Phosphoglucomutase/phosphomannomutase.	0.736
OJG76047.1	OJG82359.1	RV10_GL004294	RV10_GL000180	Hypothetical protein.	dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.	0.895
OJG76047.1	OJG82360.1	RV10_GL004294	RV10_GL000181	Hypothetical protein.	dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.	0.909
OJG76047.1	OJG82361.1	RV10_GL004294	RV10_GL000182	Hypothetical protein.	dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.	0.770
OJG76135.1	OJG76713.1	RV10_GL004196	RV10_GL003313	Hypothetical protein.	RpiR family transcriptional regulator.	0.648
OJG76135.1	OJG77753.1	RV10_GL004196	RV10_GL002284	Hypothetical protein.	Hypothetical protein.	0.487
OJG76135.1	OJG78474.1	RV10_GL004196	RV10_GL001469	Hypothetical protein.	Hypothetical protein.	0.771
OJG76135.1	OJG78475.1	RV10_GL004196	RV10_GL001470	Hypothetical protein.	Hypothetical protein.	0.527
OJG76135.1	OJG79504.1	RV10_GL004196	RV10_GL000631	Hypothetical protein.	Hypothetical protein.	0.583
OJG76135.1	OJG79576.1	RV10_GL004196	RV10_GL000703	Hypothetical protein.	Hypothetical protein.	0.583
OJG76135.1	OJG79646.1	RV10_GL004196	RV10_GL000434	Hypothetical protein.	Hypothetical protein.	0.587
OJG76135.1	OJG79748.1	RV10_GL004196	RV10_GL000536	Hypothetical protein.	Hypothetical protein.	0.583
OJG76135.1	OJG79988.1	RV10_GL004196	RV10_GL005058	Hypothetical protein.	Hypothetical protein.	0.573
OJG76135.1	OJG80656.1	RV10_GL004196	RV10_GL004393	Hypothetical protein.	Hypothetical protein.	0.708
OJG76135.1	OJG81317.1	RV10_GL004196	RV10_GL003445	Hypothetical protein.	Phosphoglucomutase/phosphomannomutase.	0.625
OJG76135.1	OJG81429.1	RV10_GL004196	RV10_GL002668	Hypothetical protein.	Hypothetical protein.	0.573