STRINGSTRING
rhlE-I rhlE-I yedA yedA PP_4769 PP_4769 PP_4771 PP_4771 PP_5713 PP_5713
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rhlE-IATP-dependent RNA helicase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the DEAD box helicase family. (443 aa)
yedAAmino acid exporter for phenylalanine, threonine; Function of homologous gene experimentally demonstrated in an other organism; transporter; Biologicalprocesses : Circulate. (306 aa)
PP_4769Homologs of previously reported genes of unknown function. (159 aa)
PP_4771Homologs of previously reported genes of unknown function. (218 aa)
PP_5713Homologs of previously reported genes of unknown function; Unknown function. (172 aa)
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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