Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PP_1680 | bluB | PP_1680 | PP_1674 | Alpha-ribazole-5'-phosphate phosphatase; Function experimentally demonstrated in the studied genus; enzyme; Biosynthesisofcofactors,prostheticgroups,andcarriers : Heme, porphyrin, and cobalamin. | 5,6-dimethylbenzimidazole synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Biosynthesisofcofactors,prostheticgroups,andcarriers : Heme, porphyrin, and cobalamin. | 0.817 |
| PP_1680 | cobB | PP_1680 | PP_1673 | Alpha-ribazole-5'-phosphate phosphatase; Function experimentally demonstrated in the studied genus; enzyme; Biosynthesisofcofactors,prostheticgroups,andcarriers : Heme, porphyrin, and cobalamin. | Cobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.865 |
| PP_1680 | cobC | PP_1680 | PP_1676 | Alpha-ribazole-5'-phosphate phosphatase; Function experimentally demonstrated in the studied genus; enzyme; Biosynthesisofcofactors,prostheticgroups,andcarriers : Heme, porphyrin, and cobalamin. | Subunit of adenosylcobinamide-phosphate synthase beta component; Function experimentally demonstrated in the studied genus; enzyme; Biosynthesis of cofactors, prosthetic groups, and carriers. | 0.917 |
| PP_1680 | cobD | PP_1680 | PP_1675 | Alpha-ribazole-5'-phosphate phosphatase; Function experimentally demonstrated in the studied genus; enzyme; Biosynthesisofcofactors,prostheticgroups,andcarriers : Heme, porphyrin, and cobalamin. | Subunit of adenosylcobinamide-phosphate synthase beta component; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.899 |
| PP_1680 | cobJ | PP_1680 | PP_4826 | Alpha-ribazole-5'-phosphate phosphatase; Function experimentally demonstrated in the studied genus; enzyme; Biosynthesisofcofactors,prostheticgroups,andcarriers : Heme, porphyrin, and cobalamin. | Precorrin-3B C17-methyltransferase. | 0.523 |
| PP_1680 | cobO | PP_1680 | PP_1672 | Alpha-ribazole-5'-phosphate phosphatase; Function experimentally demonstrated in the studied genus; enzyme; Biosynthesisofcofactors,prostheticgroups,andcarriers : Heme, porphyrin, and cobalamin. | cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. | 0.857 |
| PP_1680 | cobP | PP_1680 | PP_1678 | Alpha-ribazole-5'-phosphate phosphatase; Function experimentally demonstrated in the studied genus; enzyme; Biosynthesisofcofactors,prostheticgroups,andcarriers : Heme, porphyrin, and cobalamin. | Bifunctional cobinamide-P guanylyltransferase - adenosylcobinamide kinase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. | 0.967 |
| PP_1680 | cobQ | PP_1680 | PP_1677 | Alpha-ribazole-5'-phosphate phosphatase; Function experimentally demonstrated in the studied genus; enzyme; Biosynthesisofcofactors,prostheticgroups,andcarriers : Heme, porphyrin, and cobalamin. | Adenosyl-cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.946 |
| PP_1680 | cobS | PP_1680 | PP_1681 | Alpha-ribazole-5'-phosphate phosphatase; Function experimentally demonstrated in the studied genus; enzyme; Biosynthesisofcofactors,prostheticgroups,andcarriers : Heme, porphyrin, and cobalamin. | Cobalamin 5'-phosphate synthase / Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.996 |
| PP_1680 | cobU | PP_1680 | PP_1679 | Alpha-ribazole-5'-phosphate phosphatase; Function experimentally demonstrated in the studied genus; enzyme; Biosynthesisofcofactors,prostheticgroups,andcarriers : Heme, porphyrin, and cobalamin. | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.995 |
| PP_3409 | PP_3763 | PP_3409 | PP_3763 | Putative Cobalamin biosynthesis protein cobE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative CobF protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.882 |
| PP_3409 | cbiD | PP_3409 | PP_4831 | Putative Cobalamin biosynthesis protein cobE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative cobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.998 |
| PP_3409 | cobB | PP_3409 | PP_1673 | Putative Cobalamin biosynthesis protein cobE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Cobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.947 |
| PP_3409 | cobD | PP_3409 | PP_1675 | Putative Cobalamin biosynthesis protein cobE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Subunit of adenosylcobinamide-phosphate synthase beta component; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.710 |
| PP_3409 | cobG | PP_3409 | PP_4829 | Putative Cobalamin biosynthesis protein cobE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative precorrin-3B synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Biosynthesis of cofactors, prosthetic groups, and carriers. | 0.470 |
| PP_3409 | cobH | PP_3409 | PP_4828 | Putative Cobalamin biosynthesis protein cobE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Precorrin-8X methylmutase. | 0.917 |
| PP_3409 | cobI | PP_3409 | PP_4827 | Putative Cobalamin biosynthesis protein cobE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Precorrin-2 C(20)-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A. | 0.798 |
| PP_3409 | cobJ | PP_3409 | PP_4826 | Putative Cobalamin biosynthesis protein cobE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Precorrin-3B C17-methyltransferase. | 0.998 |
| PP_3409 | cobK | PP_3409 | PP_4832 | Putative Cobalamin biosynthesis protein cobE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Precorrin-6x reductase. | 0.807 |
| PP_3409 | cobL | PP_3409 | PP_4830 | Putative Cobalamin biosynthesis protein cobE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | precorrin-6Y C(5,15)-methyltransferase; Function of strongly homologous gene; enzyme. | 0.952 |
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