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| | syrB | Syringomycin biosynthesis enzyme 2; Function experimentally demonstrated in the studied genus; enzyme; Biologicalprocesses : Construct biomass (Anabolism). (311 aa) |
| | benB | Benzoate 1,2-dioxygenase subunit beta; Function experimentally demonstrated in the studied species; enzyme; Energy metabolism. (161 aa) |
| | aruH | Arginine--pyruvate transaminase AruH. (396 aa) |
| | catB | Muconate cycloisomerase 1; Function experimentally demonstrated in the studied species; enzyme; Energy metabolism; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (373 aa) |
| | PP_3638 | Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (354 aa) |
| | garD | Galactarate dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Fattyacidandphospholipidmetabolism : Degradation. (517 aa) |
| | kdgD | 5-dehydro-4-deoxyglucarate dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Fattyacidandphospholipidmetabolism : Degradation; Belongs to the DapA family. (303 aa) |
| | amaD | D-lysine oxidase; Function experimentally demonstrated in the studied strain; enzyme; Energymetabolism : Amino acids and amines. (414 aa) |
| | dpkA | Delta 1-piperideine-2-carboxylate reductase; Function experimentally demonstrated in the studied strain; enzyme; Energymetabolism : Amino acids and amines; Belongs to the LDH2/MDH2 oxidoreductase family. (332 aa) |
| | mvaB | Hydroxymethylglutaryl-CoA lyase. (299 aa) |
| | pobA | P-hydroxybenzoate hydroxylase; Function experimentally demonstrated in the studied species; enzyme; Fattyacidandphospholipidmetabolism : Degradation. (395 aa) |
| | PP_3526 | Transcriptional regulator, AraC family. (335 aa) |
| | PP_3492 | Short-chain acyl-CoA dehydrogenase; Function of strongly homologous gene; enzyme. (383 aa) |
| | PP_3491 | Enoly-coenzyme A hydratase/isomerase family protein. (357 aa) |
| | ilvA-I | Threonine deaminase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (530 aa) |
| | PP_3443 | Putative glyceraldehyde-3-phosphate dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Energymetabolism : Entner-Doudoroff. (539 aa) |
| | hpd | 4-hydroxyphenylpyruvate dioxygenase; Function experimentally demonstrated in the studied strain; enzyme; Energymetabolism : Amino acids and amines. (358 aa) |
| | gnuK | D-gluconate kinase; Function experimentally demonstrated in the studied strain; enzyme. (179 aa) |
| | PP_3394 | Putative 3-hydroxy-3-methylglutaryl-CoA lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the alpha-IPM synthase/homocitrate synthase family. (309 aa) |
| | fcs | feruloyl-CoA-synthetase; Function experimentally demonstrated in the studied species; enzyme; Biologicalprocesses : Scavenge (Catabolism). (627 aa) |
| | PP_3355 | Beta-ketothiolase; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa) |
| | PP_3354 | Putative Acyl-CoA dehydrogenase, ferrulic acid biotransformation protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (584 aa) |
| | gcvP-II | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (By similarity); Belongs to the GcvP family. (957 aa) |
| | ycgM | Putative isomerase/hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity. (221 aa) |
| | ilvA-II | Threonine deaminase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (504 aa) |
| | yheT | Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity. (330 aa) |
| | hutF | Probable formiminoglutamate deiminase; Function experimentally demonstrated in the studied strain; putative enzyme; Fattyacidandphospholipidmetabolism : Degradation. (454 aa) |
| | hutC | Histidine utilization repressor. (248 aa) |
| | hutU | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (557 aa) |
| | hutH | Histidine ammonia-lyase; Function experimentally demonstrated in the studied strain; enzyme; Fattyacidandphospholipidmetabolism : Degradation; Belongs to the PAL/histidase family. (510 aa) |
| | hutI | Imidazolonepropionase; Function experimentally demonstrated in the studied strain; enzyme; Fattyacidandphospholipidmetabolism : Degradation; Belongs to the metallo-dependent hydrolases superfamily. HutI family. (401 aa) |
| | hutG | N-formylglutamate deformylase; Function experimentally demonstrated in the studied strain; enzyme; Fattyacidandphospholipidmetabolism : Degradation. (267 aa) |
| | dtd | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa) |
| | PP_4983 | Putative amine oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity. (619 aa) |
| | putA | Proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. (1317 aa) |
| | putP | sodium/L-proline transporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (542 aa) |
| | tesB | Acyl-CoA thioesterase II. (289 aa) |
| | gudD | D-glucarate dehydratase / L-idarate epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (448 aa) |
| | stcD | Putative N-methylproline demethylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (678 aa) |
| | dld2 | D-lactate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism. (936 aa) |
| | mmsA-II | Methylmalonate-semialdehyde dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Biologicalprocesses : Scavenge (Catabolism). (508 aa) |
| | mmsB | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (295 aa) |
| | pcaH | Protocatechuate 3,4-dioxygenase beta chain; Function experimentally demonstrated in the studied species; enzyme; Fattyacidandphospholipidmetabolism : Degradation. (239 aa) |
| | yqeF | acetyl-CoA acetyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Fattyacidandphospholipidmetabolism : Degradation; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa) |
| | hmgA | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the ar omatic ring of 2,5-dihydroxyphenylacetate to yield maleylacetoacetate. (433 aa) |
| | hmgB | Fumarylacetoacetase; Function experimentally demonstrated in the studied species; enzyme; Energy metabolism. (430 aa) |
| | hmgC | Maleylacetoacetate isomerase; Function experimentally demonstrated in the studied species; enzyme; Energy metabolism. (210 aa) |
| | fadD-II | long-chain-fatty-acid/CoA ligase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (562 aa) |
| | fadD-I | long-chain-fatty-acid/CoA ligase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Fattyacidandphospholipidmetabolism : Degradation. (565 aa) |
| | PP_3191 | Putative threonine ammonia-lyase / dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Energymetabolism : Amino acids and amines. (350 aa) |
| | PP_3194 | Homologs of previously reported genes of unknown function. (447 aa) |
| | PP_3205 | Fumarylacetoacetate hydrolase family protein. (330 aa) |
| | PP_3207 | Putative Cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (260 aa) |
| | PP_3226 | Acyl-CoA dehydrogenase-related protein. (380 aa) |
| | PP_3258 | Homologs of previously reported genes of unknown function. (251 aa) |
| | paaZ | oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism. (684 aa) |
| | paaE | Ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism. (358 aa) |
| | paaD | Putative subunit of phenylacetate degradation enzyme; Function experimentally demonstrated in the studied species; putative regulator; Energy metabolism. (177 aa) |
| | paaC | Ring 1,2-phenylacetyl-CoA epoxidase beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism. (252 aa) |
| | paaB | Ring 1,2-phenylacetyl-CoA epoxidase regulatory subunit; Function of homologous gene experimentally demonstrated in an other organism; putative enzyme; Energy metabolism. (93 aa) |
| | paaA | Ring 1,2-phenylacetyl-CoA epoxidase alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism. (329 aa) |
| | paaK | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (439 aa) |
| | paaJ | 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism; Belongs to the thiolase-like superfamily. Thiolase family. (406 aa) |
| | paaI | hydroxyphenylacetyl-CoA thioesterase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Biologicalprocesses : Scavenge (Catabolism). (146 aa) |
| | paaH | 3-hydroxyadipyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism. (505 aa) |
| | paaG | 1,2-epoxyphenylacetyl-CoA isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism. (263 aa) |
| | paaF | enoyl-CoA hydratase-isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Biologicalprocesses : Scavenge (Catabolism); Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa) |
| | paaX | DNA-binding transcriptional repressor PaaX(phenylacetyl-CoA); Function of homologous gene experimentally demonstrated in an other organism; regulator; Energy metabolism. (307 aa) |
| | PP_3000 | MaoC domain protein. (151 aa) |
| | csiD | Carbon starvation induced protein; Acts as an alpha-ketoglutarate-dependent dioxygenase catalyzing hydroxylation of glutarate (GA) to L-2-hydroxyglutarate (L2HG). Functions in a L-lysine degradation pathway that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate. (325 aa) |
| | PP_2869 | Oxidoreductase, FMN-binding. (650 aa) |
| | PP_2835 | Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Biologicalprocesses : Scavenge (Catabolism); Belongs to the LDH2/MDH2 oxidoreductase family. (344 aa) |
| | PP_2834 | Putative D-galactarate dehydratase/Altronate dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Energymetabolism : Sugars. (513 aa) |
| | fucD | L-fuconate dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Pentose phosphate pathway; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (411 aa) |
| | PP_2814 | Homologs of previously reported genes of unknown function. (289 aa) |
| | PP_2807 | Homologs of previously reported genes of unknown function. (295 aa) |
| | PP_2793 | Acyl-CoA dehydrogenase family protein. (390 aa) |
| | PP_2791 | Aminoglycoside phosphotransferase. (376 aa) |
| | PP_2772 | Putative Monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (395 aa) |
| | sfnA | acyl-CoA dehydrogenase/oxidase family protein; Function experimentally demonstrated in the studied genus; enzyme; Cellular processes. (412 aa) |
| | sfnB | Sulfur acquisition oxidoreductase, SfnB family; Function experimentally demonstrated in the studied genus; enzyme; Cellular processes. (414 aa) |
| | quiC | Putative 3-dehydroshikimate dehydratase; Catalyzes the conversion of 3-dehydroshikimate to protocatechuate (3,4-dihydroxybenzoate), a common intermediate of quinate and shikimate degradation pathways. (635 aa) |
| | glllA | Gallate dioxygenase; Ring-cleavage dioxygenase that acts specifically on gallate to produce the keto-tautomer of 4-oxalomesaconate. Mediates the first step of gallate degradation pathway. (420 aa) |
| | gllB | 4-oxalmesaconate hydratase; Catalyzes the conversion of oxalomesaconic acid enol (OMAenol) to 4-carboxy-4-hydroxy-2-oxoadipic acid (CHA). Mediates the third step of gallate degradation pathway. (258 aa) |
| | gllC | 4-carboxy-4-hydroxy-2-oxoadipic acid aldolase; Catalyzes the conversion of 4-carboxy-4-hydroxy-2-oxoadipic acid (CHA) to pyruvate and oxaloacetate, the last step of gallate degradation pathway; Belongs to the LigK/PcmE family. (238 aa) |
| | gllD | 4-oxalomesaconate tautomerase; Catalyzes the tautomerization of the 4-oxalomesaconic acid keto (OMAketo) generated by GalA dioxygenase to 4-oxalomesaconic acid enol (OMAenol). Mediates the second step in gallate degradation pathway. (361 aa) |
| | PP_2437 | Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (414 aa) |
| | acnB | Bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Anaerobic; Belongs to the aconitase/IPM isomerase family. (869 aa) |
| | prpF | Aconitate isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism. (396 aa) |
| | PP_2308 | Putative Acyl-CoA thioesterase II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (265 aa) |
| | dauA | Catabolic D-arginine dehydrogenase, FAD-dependent; Function experimentally demonstrated in the studied genus; enzyme; Energymetabolism : Amino acids and amines. (378 aa) |
| | PP_2217 | enoyl-CoA hydratase; Function experimentally demonstrated in the studied species; enzyme; Energy metabolism; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa) |
| | acd | Short-chain acyl-CoA dehydrogenase; Function experimentally demonstrated in the studied strain; enzyme; Biologicalprocesses : Scavenge (Catabolism). (375 aa) |
| | PP_2215 | acetyl-CoA acetyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Fattyacidandphospholipidmetabolism : Degradation; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa) |
| | speB | Agmatinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Centralintermediarymetabolism : Polyamine biosynthesis; Belongs to the arginase family. (311 aa) |
| | pcaF-II | Beta-ketoadipyl CoA thiolase, beta component; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (391 aa) |
| | fadB | enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (715 aa) |
| | gdhB | NAD-specific glutamate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Amino acids and amines. (1621 aa) |
| | PP_2055 | Putative isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity. (359 aa) |
| | fadA | 3-ketoacyl-CoA thiolase (thiolase I); Function of strongly homologous gene; enzyme; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa) |
| | PP_2050 | Homologs of previously reported genes of unknown function. (150 aa) |
| | PP_2048 | Putative acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (591 aa) |
| | PP_2047 | 3-hydroxyacyl-CoA dehydrogenase family protein. (412 aa) |
| | PP_2038 | long-chain-fatty-acid--CoA ligase; Function of strongly homologous gene; enzyme; Fatty acid and phospholipid metabolism. (515 aa) |
| | PP_2036 | Putative 4-hydroxy-tetrahydrodipicolinate synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Aminoacidbiosynthesis : Aspartate family; Belongs to the DapA family. (295 aa) |
| | fadH | 2,4-dienoyl-CoA reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Fattyacidandphospholipidmetabolism : Biosynthesis. (693 aa) |
| | fadE | Medium-long chain acyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Fattyacidandphospholipidmetabolism : Degradation. (815 aa) |
| | PP_1709 | Fumarylacetoacetate hydrolase family protein. (236 aa) |
| | PP_1699 | 2-pyrone-4,6-dicarboxylic acid hydrolase; Function experimentally demonstrated in the studied species; enzyme; Fattyacidandphospholipidmetabolism : Degradation. (280 aa) |
| | PP_1412 | 3-hydroxyisobutyryl-CoA hydrolase; Function of strongly homologous gene; enzyme. (368 aa) |
| | pcaF-I | beta-ketoadipyl-CoA thiolase; Function experimentally demonstrated in the studied strain; enzyme; Energy metabolism; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa) |
| | PP_1347 | Glutathione S-transferase family protein. (210 aa) |
| | algL | Alginate lyase; Catalyzes the depolymerization of alginate by cleaving the beta-1,4 glycosidic bond between two adjacent sugar residues via a beta-elimination mechanism. May serve to degrade mislocalized alginate that is trapped in the periplasmic space. (371 aa) |
| | PP_1257 | Putative 1-pyrroline-4-hydroxy-2-carboxylate deaminase; No homology to any previously reported sequences; putative enzyme; Energymetabolism : Amino acids and amines; Belongs to the DapA family. (315 aa) |
| | PP_1255 | Putative cis-4-hydroxy-D-proline oxidase; No homology to any previously reported sequences; putative enzyme; Energymetabolism : Amino acids and amines. (415 aa) |
| | slyX | Conserved protein of unknown function, SlyX family; Homologs of previously reported genes of unknown function; Unknown function; Belongs to the SlyX family. (68 aa) |
| | edd | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (608 aa) |
| | arcA | Arginine deiminase; Function experimentally demonstrated in the studied species; enzyme; Fattyacidandphospholipidmetabolism : Degradation. (417 aa) |
| | arcB | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. (336 aa) |
| | arcC | Carbamate kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Aminoacidbiosynthesis : Glutamate family; Belongs to the carbamate kinase family. (309 aa) |
| | PP_0997 | Sigma-54 dependent transcriptional regulator/sensory box protein. (502 aa) |
| | gcvH-I | Glycine cleavage system H protein 1; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (127 aa) |
| | gcvP-I | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (By similarity); Belongs to the GcvP family. (951 aa) |
| | gcvT-I | Aminomethyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Centralintermediarymetabolism : One-carbon metabolism. (373 aa) |
| | nadC | Quinolinate phosphoribosyltransferase (decarboxylating) monomer; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Biosynthesisofcofactors,prostheticgroups,andcarriers : Pyridine nucleotides; Belongs to the NadC/ModD family. (282 aa) |
| | PP_0756 | Homologs of previously reported genes of unknown function. (423 aa) |
| | PP_0665 | Putative glyceraldehyde-3-phosphate dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Energymetabolism : Entner-Doudoroff. (472 aa) |
| | mmsA-I | Methylmalonate-semialdehyde dehydrogenase; Function of strongly homologous gene; enzyme. (497 aa) |
| | PP_0582 | Thiolase family protein; Belongs to the thiolase-like superfamily. Thiolase family. (425 aa) |
| | speA | Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (637 aa) |
| | acoB | Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta. (340 aa) |
| | anmK | Anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P (By similarity). Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling. Contributes to intrinsic fosfomycin resistance in P.putida. (363 aa) |
| | hinT | Aminoacyl-adenylate hydrolase/purine nucleoside phosphoramidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Biologicalprocesses : Maintain. (112 aa) |
| | davB | Lysine 2-monooxygenase; Function experimentally demonstrated in the studied strain; enzyme; Energymetabolism : Amino acids and amines. (560 aa) |
| | PP_0368 | Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (601 aa) |
| | PP_0335 | Glutathione S-transferase family protein. (207 aa) |
| | soxG | Sarcosine oxidase subunit gamma; Function experimentally demonstrated in the studied genus; enzyme; Fattyacidandphospholipidmetabolism : Degradation. (210 aa) |
| | soxA | Sarcosine oxidase subunit alpha; Function experimentally demonstrated in the studied genus; enzyme; Fattyacidandphospholipidmetabolism : Degradation; Belongs to the GcvT family. (1004 aa) |
| | soxD | Sarcosine oxidase subunit delta; Function experimentally demonstrated in the studied genus; enzyme; Fattyacidandphospholipidmetabolism : Degradation. (111 aa) |
| | soxB | Sarcosine oxidase subunit beta; Function experimentally demonstrated in the studied genus; enzyme; Fattyacidandphospholipidmetabolism : Degradation. (416 aa) |
| | ltaE | Low specificity L-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. (346 aa) |
| | PP_0312 | Electron transfer flavoprotein, alpha subunit; Function of strongly homologous gene; carrier; Energy metabolism. (410 aa) |
| | PP_0303 | Dehydrocarnitine cleavage enzyme; Function experimentally demonstrated in the studied genus; enzyme; Energymetabolism : Amino acids and amines. (294 aa) |
| | PP_0254 | Homologs of previously reported genes of unknown function. (146 aa) |
| | PP_0224 | Monooxygenase, DszC family. (413 aa) |
| | PP_0223 | Monooxygenase, DszC family. (406 aa) |
| | gabT | 4-aminobutyrate aminotransferase; Catalyzes the conversion of 5-aminovalerate to 5- oxopentanoate. (425 aa) |
| | gabD-I | Succinate-semialdehyde dehydrogenase (NADP+); Catalyzes the conversion of 5-oxopentanoate (glutarate semialdehyde) to glutarate. Involved in L-lysine degradation. (480 aa) |
| | gcdH | glutaryl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism. (393 aa) |
| | dfp | Coenzyme A biosynthesis bifunctional protein CoaBC; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (403 aa) |
| | lrp | DNA-binding transcriptional dual regulator, leucine-binding; Function of homologous gene experimentally demonstrated in an other organism; regulator; Aminoacidbiosynthesis : Pyruvate family. (162 aa) |
| | dadA-II | D-amino-acid:quinone oxidoreductase (deaminating); Oxidative deamination of D-amino acids; Belongs to the DadA oxidoreductase family. (434 aa) |
| | PP_5252 | Homologs of previously reported genes of unknown function. (660 aa) |
| | gcvT-II | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. (360 aa) |
| | gcvH-II | Glycine cleavage system H protein 2; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (127 aa) |
| | PP_4545 | beta-ketodecanoyl-(Acyl-carrier-protein) synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Fatty acid and phospholipid metabolism. (390 aa) |
| | PP_4523 | Putative Agmatinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the arginase family. (320 aa) |
| | ydiJ | Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity. (1006 aa) |
| | phhA | Phenylalanine-4-hydroxylase; Function experimentally demonstrated in the studied strain; enzyme; Fattyacidandphospholipidmetabolism : Degradation. (262 aa) |
| | phhR | Sigma-54 dependent transcriptional regulator; Function experimentally demonstrated in the studied strain; regulator; Fattyacidandphospholipidmetabolism : Degradation. (519 aa) |
| | astA-II | Arginine N-succinyltransferase, subunit alpha; Function experimentally demonstrated in the studied genus; enzyme; Energymetabolism : Amino acids and amines. (339 aa) |
| | astA-I | Arginine N-succinyltransferase, subunit beta; Function experimentally demonstrated in the studied genus; enzyme; Energymetabolism : Amino acids and amines. (342 aa) |
| | astD | N-succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. (487 aa) |
| | astB | N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). (449 aa) |
| | astE | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. (335 aa) |
| | PP_4462 | Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (221 aa) |
| | ooxB | Opine oxidase subunit B; Function of strongly homologous gene; enzyme; Energymetabolism : Amino acids and amines. (375 aa) |
| | ooxA | Opine oxidase subunit A; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Amino acids and amines. (464 aa) |
| | dadA-I | D-amino acid dehydrogenase 1 small subunit; Oxidative deamination of D-amino acids. (432 aa) |
| | PP_4423 | Homologs of previously reported genes of unknown function. (331 aa) |
| | bkdAB | Branched-chain alpha-keto acid dehydrogenase complex, beta subunit; Function experimentally demonstrated in the studied species; enzyme; Fattyacidandphospholipidmetabolism : Degradation. (339 aa) |
| | PP_4311 | Putative D-amino acid dehydrogenase 2 small subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Energymetabolism : Amino acids and amines. (397 aa) |
| | gcl | Glyoxylate carboligase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism; Belongs to the TPP enzyme family. (591 aa) |
| | etfA | Electron transfer flavoprotein subunit alpha. (309 aa) |
| | PP_4155 | Putative amine oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity. (407 aa) |
| | mccB | methylcrotonyl-CoA carboxylase biotin-containing subunit beta; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Fattyacidandphospholipidmetabolism : Degradation. (535 aa) |
| | ivd | isovaleryl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Amino acids and amines. (387 aa) |
| | PP_4030 | Enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family. (280 aa) |
| | PP_3925 | Homologs of previously reported genes of unknown function. (355 aa) |
| | hbd | 3-hydroxybutyryl-CoA dehydrogenase. (282 aa) |
| | bktB | Beta-ketothiolase BktB; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa) |
| | glcE | Glycolate oxidase, putative FAD-binding subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Central intermediary metabolism. (350 aa) |
| | PP_3732 | Enoyl-CoA hydratase/isomerase family protein. (248 aa) |
| | PP_3728 | Sensor histidine kinase/response regulator. (750 aa) |
| | PP_3726 | Enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family. (264 aa) |
| | PP_3725 | Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (386 aa) |
