STRINGSTRING
PP_0486 PP_0486 PP_0858 PP_0858 hisC hisC PP_1109 PP_1109 dapC dapC cobC cobC alaA alaA tyrB tyrB PP_2542 PP_2542 PP_2642 PP_2642 PP_2948 PP_2948 alaC alaC PP_5342 PP_5342 yjiR yjiR PP_4692 PP_4692 PP_4429 PP_4429 PP_4197 PP_4197 aspC aspC PP_3750 PP_3750 aruH aruH amaC amaC PP_3544 PP_3544 bioF bioF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PP_0486Transcriptional regulator, GntR family. (474 aa)
PP_0858Putative methionine/glutamine aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (382 aa)
hisCHistidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (348 aa)
PP_1109Transcriptional regulator, GntR family. (446 aa)
dapCN-succinyl-L,L-diaminopimelate aminotransferase alternative; Function of strongly homologous gene; enzyme; Aminoacidbiosynthesis : Aspartate family. (398 aa)
cobCSubunit of adenosylcobinamide-phosphate synthase beta component; Function experimentally demonstrated in the studied genus; enzyme; Biosynthesis of cofactors, prosthetic groups, and carriers. (330 aa)
alaAGlutamate-pyruvate aminotransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (403 aa)
tyrBAromatic-amino-acid aminotransferase; Function experimentally demonstrated in the studied strain; enzyme; Aminoacidbiosynthesis : Aspartate family. (398 aa)
PP_2542Transcriptional regulator, GntR family. (474 aa)
PP_2642Transcriptional regulator, GntR family. (496 aa)
PP_2948Transcriptional regulator, GntR family. (460 aa)
alaCAminotransferase; Function of strongly homologous gene; enzyme; Regulatory functions. (402 aa)
PP_5342Transcriptional regulator, GntR family. (509 aa)
yjiRPutative regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Transcription. (496 aa)
PP_4692Putative aspartate/tyrosine/aromatic aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity. (390 aa)
PP_4429Transcriptional regulator, GntR family. (466 aa)
PP_4197Transcriptional regulator, GntR family. (530 aa)
aspCAminotransferase; Function experimentally demonstrated in the studied species; enzyme; Biologicalprocesses : Scavenge (Catabolism). (402 aa)
PP_3750Transcriptional regulator, GntR family. (477 aa)
aruHArginine--pyruvate transaminase AruH. (396 aa)
amaCD-lysine aminotransferase; Function experimentally demonstrated in the studied strain; enzyme; Aminoacidbiosynthesis : Aromatic amino acid family. (398 aa)
PP_3544Transcriptional regulator, GntR family. (469 aa)
bioF8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. (390 aa)
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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