STRINGSTRING
PP_3364 PP_3364 PP_3075 PP_3075 PP_2790 PP_2790 PP_2739 PP_2739 PP_2683 PP_2683 PP_2664 PP_2664 PP_2557 PP_2557 PP_2356 PP_2356 PP_2354 PP_2354 PP_2258 PP_2258 PP_2257 PP_2257 PP_2111 PP_2111 PP_2100 PP_2100 PP_2097 PP_2097 PP_1983 PP_1983 yegE yegE PP_1695 PP_1695 PP_1350 PP_1350 PP_1154 PP_1154 PP_0997 PP_0997 PP_0779 PP_0779 PP_0672 PP_0672 PP_0546 PP_0546 PP_0409 PP_0409 PP_0386 PP_0386 PP_0337 PP_0337 PP_0218 PP_0218 PP_0216 PP_0216 kinB kinB PP_0051 PP_0051 phoR phoR glnL glnL PP_4959 PP_4959 PP_4695 PP_4695 PP_4629 PP_4629 PP_4602 PP_4602 PP_4521 PP_4521 phhR phhR PP_4405 PP_4405 fleS fleS PP_3835 PP_3835 PP_3711 PP_3711 PP_3651 PP_3651 PP_3552 PP_3552 PP_3546 PP_3546 PP_3545 PP_3545 PP_3467 PP_3467 PP_3430 PP_3430 PP_3414 PP_3414 PP_3319 PP_3319
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PP_3364Response regulator. (847 aa)
PP_3075Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (481 aa)
PP_2790Sigma-54 dependent sensory box protein. (650 aa)
PP_2739Putative Sensory box protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (151 aa)
PP_2683Putative sensory box histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (556 aa)
PP_2664Putative hybrid sensor and regulator, histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Regulatory functions. (632 aa)
PP_2557Sensory box protein. (287 aa)
PP_2356Putative Phytochrome family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (755 aa)
PP_2354Sensory box histidine kinase/response regulator. (795 aa)
PP_2258Sensory box protein. (562 aa)
PP_2257Putative aerotaxis receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (521 aa)
PP_2111Putative aerotaxis receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (521 aa)
PP_2100Two-component sensor protein; Function of homologous gene experimentally demonstrated in an other organism; receptor. (1211 aa)
PP_2097Sensory box protein. (800 aa)
PP_1983PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase; Function of strongly homologous gene; regulator; Regulatory functions. (1098 aa)
yegEDiguanylate cyclase with phosphodiesterase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Proteinfate : Protein modification and repair. (841 aa)
PP_1695Putative Sodium-solute symporter/sensory box histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (1159 aa)
PP_1350Sensory box histidine kinase/response regulator. (676 aa)
PP_1154Sensory box protein. (861 aa)
PP_0997Sigma-54 dependent transcriptional regulator/sensory box protein. (502 aa)
PP_0779Methyl-accepting chemotaxis transducer/sensory box protein. (446 aa)
PP_0672Sensory box protein. (1276 aa)
PP_0546Sigma-54 dependent transcriptional regulator; Function of strongly homologous gene; regulator; Regulatory functions. (671 aa)
PP_0409Sensory box histidine kinase. (795 aa)
PP_0386Sensory box protein. (1247 aa)
PP_0337Sensory box protein. (896 aa)
PP_0218Sensory box protein. (631 aa)
PP_0216Putative sensory box/GGDEF family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Signal transduction. (342 aa)
kinBAlginate biosynthesis sensor protein KinB. (593 aa)
PP_0051Putative sigma-54 dependent transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (430 aa)
phoRTwo-component system sensory histidine kinase; Function experimentally demonstrated in the studied strain; receptor; Centralintermediarymetabolism : Phosphorus compounds. (435 aa)
glnLTwo-component system sensory histidine kinase/phosphatase GlnL/GlnG; Function of homologous gene experimentally demonstrated in an other organism; receptor; Centralintermediarymetabolism : Nitrogen metabolism. (361 aa)
PP_4959Diguanylate cyclase; Function of strongly homologous gene; enzyme. (708 aa)
PP_4695Sensory box histidine kinase. (991 aa)
PP_4629Sensory box protein. (142 aa)
PP_4602Transcriptional regulator, AraC family. (279 aa)
PP_4521Putative aerotaxis receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (521 aa)
phhRSigma-54 dependent transcriptional regulator; Function experimentally demonstrated in the studied strain; regulator; Fattyacidandphospholipidmetabolism : Degradation. (519 aa)
PP_4405Sensory box protein. (332 aa)
fleSSensory box histidine kinase FleS. (405 aa)
PP_3835Sensory box histidine kinase. (386 aa)
PP_3711Diguanylate cyclase; Function of strongly homologous gene; enzyme. (503 aa)
PP_3651Sensor histidine kinase/response regulator. (727 aa)
PP_3552Sensory box histidine kinase. (468 aa)
PP_3546Sensory box histidine kinase/response regulator. (688 aa)
PP_3545Sensory box histidine kinase/response regulator. (553 aa)
PP_3467Sigma-54 dependent transcriptional regulator. (636 aa)
PP_3430Sensory box histidine kinase/response regulator. (705 aa)
PP_3414Methyl-accepting chemotaxis transducer/sensory box protein. (439 aa)
PP_3319Sensory box protein/GGDEF domain protein. (733 aa)
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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