STRINGSTRING
mutL mutL gyrB gyrB czrSA czrSA kinB kinB envZ envZ PP_0264 PP_0264 PP_0270 PP_0270 PP_0409 PP_0409 pfeS-I pfeS-I PP_0769 PP_0769 PP_0887 PP_0887 colS colS PP_1013 PP_1013 PP_1067 PP_1067 PP_1182 PP_1182 phoQ phoQ PP_1350 PP_1350 dctB dctB PP_1421 PP_1421 PP_1437 PP_1437 PP_1492 PP_1492 gacS gacS pfeS-II pfeS-II PP_1695 PP_1695 PP_1875 PP_1875 PP_2100 PP_2100 PP_2127 PP_2127 PP_2157 PP_2157 PP_2348 PP_2348 PP_2354 PP_2354 PP_2356 PP_2356 PP_2402 PP_2402 PP_2664 PP_2664 PP_2671 PP_2671 PP_2683 PP_2683 PP_2714 PP_2714 PP_2906 PP_2906 PP_2944 PP_2944 PP_2945 PP_2945 PP_3024 PP_3024 PP_3364 PP_3364 PP_3371 PP_3371 PP_3413 PP_3413 PP_3420 PP_3420 PP_3421 PP_3421 PP_3429 PP_3429 PP_3430 PP_3430 PP_3453 PP_3453 PP_3545 PP_3545 PP_3546 PP_3546 PP_3552 PP_3552 PP_3651 PP_3651 PP_3728 PP_3728 PP_3758 PP_3758 PP_3761 PP_3761 PP_3835 PP_3835 PP_3968 PP_3968 PP_3988 PP_3988 kdpD kdpD PP_4173 PP_4173 htpG htpG PP_4224 PP_4224 cheA cheA PP_4363 PP_4363 fleS fleS copS copS phoR phoR PP_5242 PP_5242 glnL glnL PP_4988 PP_4988 PP_4505 PP_4505 PP_4695 PP_4695 PP_4781 PP_4781 PP_4824 PP_4824 parE parE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mutLDNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (632 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (806 aa)
czrSAMetal-sensor histidine kinase; Member of a two-component regulatory system. (472 aa)
kinBAlginate biosynthesis sensor protein KinB. (593 aa)
envZOsmolarity sensor protein EnvZ. (437 aa)
PP_0264Sensor histidine kinase. (604 aa)
PP_0270Sensor histidine kinase. (455 aa)
PP_0409Sensory box histidine kinase. (795 aa)
pfeS-IHistidine kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (442 aa)
PP_0769Sensor histidine kinase. (230 aa)
PP_0887Sensor histidine kinase. (450 aa)
colSIntegral membrane sensor signal transduction histidine kinase; Function of strongly homologous gene; regulator; Signal transduction. (436 aa)
PP_1013Sensor histidine kinase. (484 aa)
PP_1067Sensor histidine kinase. (635 aa)
PP_1182Sensor histidine kinase. (535 aa)
phoQSensor protein; Function of homologous gene experimentally demonstrated in an other organism; regulator; Transcription. (448 aa)
PP_1350Sensory box histidine kinase/response regulator. (676 aa)
dctBC4-dicarboxylate transport sensor protein. (585 aa)
PP_1421Putative Sensor histidine kinase TctE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (463 aa)
PP_1437Heavy metal sensor histidine kinase; Member of a two-component regulatory system. (460 aa)
PP_1492Sensor histidine kinase/response regulator. (762 aa)
gacSSensor protein GacS. (917 aa)
pfeS-IIHistidine kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (458 aa)
PP_1695Putative Sodium-solute symporter/sensory box histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (1159 aa)
PP_1875Sensor histidine kinase/response regulator. (785 aa)
PP_2100Two-component sensor protein; Function of homologous gene experimentally demonstrated in an other organism; receptor. (1211 aa)
PP_2127Sensor histidine kinase. (313 aa)
PP_2157Sensor histidine kinase; Member of a two-component regulatory system. (450 aa)
PP_2348Sensor histidine kinase. (439 aa)
PP_2354Sensory box histidine kinase/response regulator. (795 aa)
PP_2356Putative Phytochrome family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (755 aa)
PP_2402Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (428 aa)
PP_2664Putative hybrid sensor and regulator, histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Regulatory functions. (632 aa)
PP_2671Sensor histidine kinase. (424 aa)
PP_2683Putative sensory box histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (556 aa)
PP_2714Sensor histidine kinase. (454 aa)
PP_2906Sensor histidine kinase. (463 aa)
PP_2944Sensor histidine kinase. (604 aa)
PP_2945Putative sensor histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (467 aa)
PP_3024Homologs of previously reported genes of unknown function. (398 aa)
PP_3364Response regulator. (847 aa)
PP_3371Sensor histidine kinase. (419 aa)
PP_3413Sensor histidine kinase/response regulator. (1093 aa)
PP_3420Sensor histidine kinase. (497 aa)
PP_3421Sensor histidine kinase. (483 aa)
PP_3429Response regulator/sensor histidine kinase. (538 aa)
PP_3430Sensory box histidine kinase/response regulator. (705 aa)
PP_3453Putative Sensor protein RstB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (433 aa)
PP_3545Sensory box histidine kinase/response regulator. (553 aa)
PP_3546Sensory box histidine kinase/response regulator. (688 aa)
PP_3552Sensory box histidine kinase. (468 aa)
PP_3651Sensor histidine kinase/response regulator. (727 aa)
PP_3728Sensor histidine kinase/response regulator. (750 aa)
PP_3758Response regulator/sensor histidine kinase. (408 aa)
PP_3761Sensor histidine kinase/response regulator. (1155 aa)
PP_3835Sensory box histidine kinase. (386 aa)
PP_3968Sensor histidine kinase. (372 aa)
PP_3988Homologs of previously reported genes of unknown function. (682 aa)
kdpDSensor protein; Function of homologous gene experimentally demonstrated in an other organism; regulator; Transcription. (884 aa)
PP_4173Sensor histidine kinase/response regulator. (643 aa)
htpGChaperone protein HtpG; Molecular chaperone. Has ATPase activity. (634 aa)
PP_4224Sensor histidine kinase. (440 aa)
cheAChemotaxis histidine kinase CheA. (747 aa)
PP_4363Sensor histidine kinase/response regulator. (563 aa)
fleSSensory box histidine kinase FleS. (405 aa)
copSCopper sensor protein; Member of a two-component regulatory system. (469 aa)
phoRTwo-component system sensory histidine kinase; Function experimentally demonstrated in the studied strain; receptor; Centralintermediarymetabolism : Phosphorus compounds. (435 aa)
PP_5242Sensor histidine kinase/GAF domain protein. (1682 aa)
glnLTwo-component system sensory histidine kinase/phosphatase GlnL/GlnG; Function of homologous gene experimentally demonstrated in an other organism; receptor; Centralintermediarymetabolism : Nitrogen metabolism. (361 aa)
PP_4988Signal transduction histidine kinase CheA/CheY-like receiver; Function of strongly homologous gene; enzyme; Signaltransduction : Two-component systems. (1646 aa)
PP_4505Sensor histidine kinase. (446 aa)
PP_4695Sensory box histidine kinase. (991 aa)
PP_4781Sensor histidine kinase. (662 aa)
PP_4824Sensor histidine kinase/response regulator. (923 aa)
parEDNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (634 aa)
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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