(75 nodes) ABC transporters network (Acinetobacter sp. NCu2D2)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANF83048.1	Urea ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
	ANF80791.1	Ion channel; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
	ANF80981.1	ABC transporter ATP-binding protein; Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; Derived by automated computational analysis using gene prediction method: Protein Homology. (636 aa)
	ANF81000.1	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
	macB	Macrolide ABC transporter permease/ATP-binding protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (658 aa)
	ANF81219.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1199 aa)
	ANF81326.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
	ANF81327.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (822 aa)
	ANF81427.1	Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa)
	ANF81428.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
	ANF81429.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
	ANF81430.1	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (527 aa)
	ANF81486.1	Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
	ANF81487.1	Phosphate ABC transporter permease subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (459 aa)
	ANF81488.1	Phosphate ABC transporter, permease protein PstA; Derived by automated computational analysis using gene prediction method: Protein Homology. (464 aa)
	pstB	Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (303 aa)
	ANF83098.1	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (711 aa)
	ANF81605.1	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
	ANF81607.1	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (712 aa)
	ANF81622.1	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
	metN	Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (341 aa)
	ANF81624.1	NLPA lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
	ANF81722.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
	ANF81800.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa)
	A3K93_06700	Sulfonate ABC transporter substrate-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	ANF81911.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)
	ANF81912.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
	msbA	Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (575 aa)
	ANF81987.1	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)
	lptD	LPS export ABC transporter periplasmic protein LptC; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (812 aa)
	ANF82107.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	ANF82108.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
	ANF82136.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	ANF82137.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
	ANF82139.1	Sulfate ABC transporter permease subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (277 aa)
	ANF82140.1	Sulfate ABC transporter permease subunit CysW; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
	cysA	Sulfate ABC transporter ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (353 aa)
	tolR	Protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (149 aa)
	lolD	Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. (227 aa)
	ANF82187.1	Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
	ANF82195.1	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
	ANF82196.1	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
	xerC	Recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (304 aa)
	ANF82322.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
	ANF82350.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (567 aa)
	ANF82603.1	Toluene tolerance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)
	ANF83167.1	Toluene tolerance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
	ANF82604.1	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	ANF82605.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
	ANF82606.1	ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
	ANF82639.1	Hemerythrin; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
	ANF82685.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (571 aa)
	ANF83179.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)
	ANF82711.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
	ANF82715.1	Energy-dependent translational throttle protein EttA; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa)
	ANF82747.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (600 aa)
	ANF82773.1	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
	ANF82774.1	LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
	ANF82796.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
	ANF82826.1	DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
	znuC	Zinc ABC transporter ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (263 aa)
	ANF82829.1	DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
	ANF83188.1	Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
	ANF82835.1	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
	ANF82836.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (71 aa)
	ANF82950.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	ANF82953.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (645 aa)
	ssuB	Part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
	ANF82996.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
	ANF82998.1	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
	ANF82999.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
	ANF83044.1	Urea ABC transporter ATP-binding subunit UrtE; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
	ANF83045.1	Urea ABC transporter ATP-binding protein UrtD; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
	ANF83046.1	Urea ABC transporter permease subunit UrtC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (387 aa)
	ANF83047.1	Urea ABC transporter permease subunit UrtB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (306 aa)

Your Current Organism:

Acinetobacter sp. NCu2D2

NCBI taxonomy Id: 1608473
Other names: A. sp. NCu2D-2, Acinetobacter sp. NCu2D-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A3K93_06700	ANF81722.1	A3K93_06700	A3K93_05665	Sulfonate ABC transporter substrate-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
A3K93_06700	ANF82835.1	A3K93_06700	A3K93_11990	Sulfonate ABC transporter substrate-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
A3K93_06700	ANF82950.1	A3K93_06700	A3K93_12630	Sulfonate ABC transporter substrate-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.516
A3K93_06700	ANF82996.1	A3K93_06700	A3K93_12900	Sulfonate ABC transporter substrate-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.945
A3K93_06700	ANF82998.1	A3K93_06700	A3K93_12910	Sulfonate ABC transporter substrate-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
A3K93_06700	ANF82999.1	A3K93_06700	A3K93_12915	Sulfonate ABC transporter substrate-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
A3K93_06700	ssuB	A3K93_06700	A3K93_12895	Sulfonate ABC transporter substrate-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	Part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
ANF81000.1	ANF82187.1	A3K93_01540	A3K93_08255	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400
ANF81326.1	ANF81327.1	A3K93_03360	A3K93_03365	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
ANF81327.1	ANF81326.1	A3K93_03365	A3K93_03360	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
ANF81327.1	ANF82187.1	A3K93_03365	A3K93_08255	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.455
ANF81327.1	lolD	A3K93_03365	A3K93_08250	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.	0.487
ANF81327.1	macB	A3K93_03365	A3K93_01765	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Macrolide ABC transporter permease/ATP-binding protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.	0.714
ANF81427.1	ANF81428.1	A3K93_03935	A3K93_03940	Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
ANF81427.1	ANF81429.1	A3K93_03935	A3K93_03945	Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
ANF81427.1	ANF81430.1	A3K93_03935	A3K93_03950	Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.980
ANF81427.1	ANF82829.1	A3K93_03935	A3K93_11955	Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.466
ANF81428.1	ANF81427.1	A3K93_03940	A3K93_03935	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
ANF81428.1	ANF81429.1	A3K93_03940	A3K93_03945	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
ANF81428.1	ANF81430.1	A3K93_03940	A3K93_03950	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.983