STRINGSTRING
AMM53876.1 AMM53876.1 AMM53877.1 AMM53877.1 AMM53878.1 AMM53878.1 AMM53879.1 AMM53879.1 AMM53880.1 AMM53880.1 AMM53881.1 AMM53881.1 AMM53882.1 AMM53882.1 AMM54705.1 AMM54705.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMM53876.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
AMM53877.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
AMM53878.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)
AMM53879.1Protein frxA; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
AMM53880.1AcaC; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
AMM53881.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
AMM53882.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. UPF0219 family. (349 aa)
AMM54705.1XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
Your Current Organism:
Pyrococcus kukulkanii
NCBI taxonomy Id: 1609559
Other names: DSM 101590, P. kukulkanii, Pyrococcus kukulkanii Callac et al. 2016, Pyrococcus sp. NCB100, Souchotheque de Bretagne BG1337, strain NCB100
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