Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMM53236.1 | glyA | TQ32_01035 | TQ32_08560 | 2-amino-3-ketobutyrate CoA ligase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.958 |
| AMM53295.1 | glyA | TQ32_01360 | TQ32_08560 | Response regulator SirA; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.419 |
| AMM53574.1 | AMM54879.1 | TQ32_03075 | TQ32_10585 | Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.431 |
| AMM53574.1 | mfnA | TQ32_03075 | TQ32_05860 | Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-tyrosine decarboxylase; Catalyzes the decarboxylation of L-aspartate to produce beta- alanine; Belongs to the group II decarboxylase family. MfnA subfamily. | 0.910 |
| AMM53625.1 | AMM54680.1 | TQ32_03375 | TQ32_09415 | 4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 4-aminobutyrate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.906 |
| AMM53625.1 | AMM54733.1 | TQ32_03375 | TQ32_09735 | 4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.906 |
| AMM53625.1 | mfnA | TQ32_03375 | TQ32_05860 | 4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | L-tyrosine decarboxylase; Catalyzes the decarboxylation of L-aspartate to produce beta- alanine; Belongs to the group II decarboxylase family. MfnA subfamily. | 0.938 |
| AMM53886.1 | AMM53889.1 | TQ32_04860 | TQ32_04875 | 2-ketoisovalerate ferredoxin oxidoreductase; Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate ferredoxin oxidoreductase; Catalyzes the formation of acetyl-CoA from pyruvate and coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.744 |
| AMM53889.1 | AMM53886.1 | TQ32_04875 | TQ32_04860 | Pyruvate ferredoxin oxidoreductase; Catalyzes the formation of acetyl-CoA from pyruvate and coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-ketoisovalerate ferredoxin oxidoreductase; Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.744 |
| AMM53889.1 | AMM54119.1 | TQ32_04875 | TQ32_06240 | Pyruvate ferredoxin oxidoreductase; Catalyzes the formation of acetyl-CoA from pyruvate and coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.821 |
| AMM53889.1 | AMM54513.1 | TQ32_04875 | TQ32_08505 | Pyruvate ferredoxin oxidoreductase; Catalyzes the formation of acetyl-CoA from pyruvate and coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-oxoglutarate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AMM53889.1 | AMM54517.1 | TQ32_04875 | TQ32_08530 | Pyruvate ferredoxin oxidoreductase; Catalyzes the formation of acetyl-CoA from pyruvate and coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-oxoglutarate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AMM53889.1 | AMM55034.1 | TQ32_04875 | TQ32_10105 | Pyruvate ferredoxin oxidoreductase; Catalyzes the formation of acetyl-CoA from pyruvate and coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.823 |
| AMM54119.1 | AMM53889.1 | TQ32_06240 | TQ32_04875 | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate ferredoxin oxidoreductase; Catalyzes the formation of acetyl-CoA from pyruvate and coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.821 |
| AMM54119.1 | AMM54513.1 | TQ32_06240 | TQ32_08505 | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-oxoglutarate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.910 |
| AMM54119.1 | AMM54517.1 | TQ32_06240 | TQ32_08530 | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-oxoglutarate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.910 |
| AMM54119.1 | AMM55034.1 | TQ32_06240 | TQ32_10105 | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMM54513.1 | AMM53889.1 | TQ32_08505 | TQ32_04875 | 2-oxoglutarate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate ferredoxin oxidoreductase; Catalyzes the formation of acetyl-CoA from pyruvate and coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AMM54513.1 | AMM54119.1 | TQ32_08505 | TQ32_06240 | 2-oxoglutarate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.910 |
| AMM54513.1 | AMM54517.1 | TQ32_08505 | TQ32_08530 | 2-oxoglutarate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-oxoglutarate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.940 |
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