(32 nodes) Mostly uncharacterized, incl. Porin, and Phosphotransferase activity, for other substituted phosphate groups network (Novosphingobium sp. P6W)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KIS34284.1	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)
	KIS34291.1	Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
	KIS34292.1	Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)
	KIS34448.1	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)
	KIS33804.1	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
	KIS34105.1	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
	KIS33070.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
	KIS33535.1	Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
	KIS32866.1	Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	KIS32867.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)
	KIS32868.1	Cellulose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1182 aa)
	bcsA	Cellulose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1485 aa)
	KIS32644.1	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
	KIS32645.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)
	KIS32184.1	Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
	KIS31309.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
	KIS30805.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
	KIS30836.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
	KIS30806.1	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
	KIS30463.1	Polysaccharide biosynthesis family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
	KIS30520.1	Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
	KIS30464.1	HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)
	KIS30465.1	Phosphatidylglycerophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (378 aa)
	KIS30521.1	Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
	KIS30466.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	KIS30467.1	Cobalamin biosynthesis protein CobY; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
	KIS30315.1	Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
	KIS30137.1	Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
	KIS29936.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)
	KIS29640.1	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)
	KIS29641.1	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa)
	KIS29642.1	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (763 aa)

Your Current Organism:

Novosphingobium sp. P6W

NCBI taxonomy Id: 1609758
Other names: N. sp. P6W

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KIS29640.1	KIS29641.1	TQ38_26350	TQ38_26355	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
KIS29640.1	KIS29642.1	TQ38_26350	TQ38_26360	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
KIS29641.1	KIS29640.1	TQ38_26355	TQ38_26350	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
KIS29641.1	KIS29642.1	TQ38_26355	TQ38_26360	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KIS29641.1	KIS29936.1	TQ38_26355	TQ38_25610	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.516
KIS29641.1	KIS30137.1	TQ38_26355	TQ38_24575	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.649
KIS29641.1	KIS32644.1	TQ38_26355	TQ38_10115	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
KIS29641.1	KIS32868.1	TQ38_26355	TQ38_10105	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cellulose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
KIS29641.1	KIS34284.1	TQ38_26355	TQ38_01225	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.683
KIS29641.1	KIS34448.1	TQ38_26355	TQ38_02405	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.566
KIS29642.1	KIS29640.1	TQ38_26360	TQ38_26350	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
KIS29642.1	KIS29641.1	TQ38_26360	TQ38_26355	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KIS29642.1	KIS29936.1	TQ38_26360	TQ38_25610	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
KIS29642.1	KIS30315.1	TQ38_26360	TQ38_23360	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.451
KIS29642.1	KIS30463.1	TQ38_26360	TQ38_22160	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide biosynthesis family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
KIS29642.1	KIS30467.1	TQ38_26360	TQ38_22190	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalamin biosynthesis protein CobY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400
KIS29642.1	KIS30805.1	TQ38_26360	TQ38_20600	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.702
KIS29642.1	KIS30806.1	TQ38_26360	TQ38_20610	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
KIS29642.1	KIS30836.1	TQ38_26360	TQ38_20605	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.696
KIS29642.1	KIS31309.1	TQ38_26360	TQ38_17590	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.455