(21 nodes) Glycosyl transferases group 1 network (Novosphingobium sp. P6W)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KIS34404.1	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
	KIS33681.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (431 aa)
	KIS33848.1	GDP-mannose-dependent alpha-mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
	KIS34100.1	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
	KIS34102.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
	KIS33989.1	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
	KIS33520.1	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
	KIS33065.1	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
	KIS32666.1	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
	KIS31818.1	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (740 aa)
	KIS31216.1	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
	KIS30801.1	Group 1 glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
	KIS30804.1	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
	KIS30806.1	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
	KIS30642.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
	KIS30684.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
	KIS30685.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (431 aa)
	KIS30287.1	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
	KIS30100.1	Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
	KIS30080.1	Colanic acid biosynthesis glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
	KIS29505.1	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)

Your Current Organism:

Novosphingobium sp. P6W

NCBI taxonomy Id: 1609758
Other names: N. sp. P6W

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KIS30100.1	KIS31216.1	TQ38_24390	TQ38_18365	Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.596
KIS30100.1	KIS33681.1	TQ38_24390	TQ38_02885	Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.462
KIS30100.1	KIS33989.1	TQ38_24390	TQ38_04875	Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.766
KIS30642.1	KIS31216.1	TQ38_21165	TQ38_18365	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.441
KIS30684.1	KIS31216.1	TQ38_21175	TQ38_18365	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
KIS30684.1	KIS32666.1	TQ38_21175	TQ38_10240	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.443
KIS30685.1	KIS31216.1	TQ38_21195	TQ38_18365	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.527
KIS30685.1	KIS33989.1	TQ38_21195	TQ38_04875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.424
KIS30801.1	KIS30804.1	TQ38_20580	TQ38_20595	Group 1 glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
KIS30801.1	KIS30806.1	TQ38_20580	TQ38_20610	Group 1 glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.691
KIS30801.1	KIS31216.1	TQ38_20580	TQ38_18365	Group 1 glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.485
KIS30801.1	KIS32666.1	TQ38_20580	TQ38_10240	Group 1 glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
KIS30804.1	KIS30801.1	TQ38_20595	TQ38_20580	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	Group 1 glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
KIS30804.1	KIS30806.1	TQ38_20595	TQ38_20610	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
KIS30804.1	KIS33520.1	TQ38_20595	TQ38_05800	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.678
KIS30804.1	KIS33848.1	TQ38_20595	TQ38_03970	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	GDP-mannose-dependent alpha-mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.409
KIS30804.1	KIS34404.1	TQ38_20595	TQ38_02105	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
KIS30806.1	KIS30801.1	TQ38_20610	TQ38_20580	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	Group 1 glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.691
KIS30806.1	KIS30804.1	TQ38_20610	TQ38_20595	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
KIS30806.1	KIS31216.1	TQ38_20610	TQ38_18365	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.526