STRINGSTRING
AMD16604.1 AMD16604.1 AMD17255.1 AMD17255.1 AMD17287.1 AMD17287.1 AMD17713.1 AMD17713.1 AMD17919.1 AMD17919.1 AMD17920.1 AMD17920.1 AMD17921.1 AMD17921.1 AMD17922.1 AMD17922.1 AMD17923.1 AMD17923.1 AMD17924.1 AMD17924.1 AMD17926.1 AMD17926.1 AMD17927.1 AMD17927.1 AMD18061.1 AMD18061.1 AMD18286.1 AMD18286.1 AMD18492.1 AMD18492.1 AMD18495.1 AMD18495.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMD16604.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
AMD17255.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)
AMD17287.1Nitrogenase iron protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NifH/BchL/ChlL family. (264 aa)
AMD17713.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
AMD17919.1Nitrogenase molybdenum-iron cofactor biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
AMD17920.1Methanogeneis marker protein 17; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)
AMD17921.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
AMD17922.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)
AMD17923.1Methanogenesis marker protein 6; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
AMD17924.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0288 family. (515 aa)
AMD17926.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
AMD17927.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
AMD18061.1UDP-N-acetylmuramyl peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)
AMD18286.1Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
AMD18492.1Methanogeneis marker protein 5; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)
AMD18495.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (357 aa)
Your Current Organism:
Methanobrevibacter sp. YE315
NCBI taxonomy Id: 1609968
Other names: M. sp. YE315
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