Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMD17851.1 | rpl14 | TL18_07350 | TL18_07435 | 50S ribosomal protein L14e; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.999 |
| AMD17851.1 | rpl18 | TL18_07350 | TL18_07395 | 50S ribosomal protein L14e; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
| AMD17851.1 | rpl22 | TL18_07350 | TL18_07465 | 50S ribosomal protein L14e; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
| AMD17851.1 | rpl37ae | TL18_07350 | TL18_04050 | 50S ribosomal protein L14e; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L37; Binds to the 23S rRNA. | 0.999 |
| AMD17851.1 | rpl44e | TL18_07350 | TL18_09930 | 50S ribosomal protein L14e; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L44; Binds to the 23S rRNA. | 0.999 |
| rpl14 | AMD17851.1 | TL18_07435 | TL18_07350 | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 50S ribosomal protein L14e; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| rpl14 | rpl18 | TL18_07435 | TL18_07395 | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
| rpl14 | rpl22 | TL18_07435 | TL18_07465 | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
| rpl14 | rpl37ae | TL18_07435 | TL18_04050 | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 50S ribosomal protein L37; Binds to the 23S rRNA. | 0.999 |
| rpl14 | rpl44e | TL18_07435 | TL18_09930 | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 50S ribosomal protein L44; Binds to the 23S rRNA. | 0.999 |
| rpl18 | AMD17851.1 | TL18_07395 | TL18_07350 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 50S ribosomal protein L14e; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| rpl18 | rpl14 | TL18_07395 | TL18_07435 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.999 |
| rpl18 | rpl22 | TL18_07395 | TL18_07465 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
| rpl18 | rpl37ae | TL18_07395 | TL18_04050 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 50S ribosomal protein L37; Binds to the 23S rRNA. | 0.999 |
| rpl18 | rpl44e | TL18_07395 | TL18_09930 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 50S ribosomal protein L44; Binds to the 23S rRNA. | 0.999 |
| rpl22 | AMD17851.1 | TL18_07465 | TL18_07350 | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 50S ribosomal protein L14e; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| rpl22 | rpl14 | TL18_07465 | TL18_07435 | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.999 |
| rpl22 | rpl18 | TL18_07465 | TL18_07395 | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
| rpl22 | rpl37ae | TL18_07465 | TL18_04050 | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 50S ribosomal protein L37; Binds to the 23S rRNA. | 0.999 |
| rpl22 | rpl44e | TL18_07465 | TL18_09930 | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 50S ribosomal protein L44; Binds to the 23S rRNA. | 0.999 |
page 1 of 2