19 items (Methanobrevibacter sp. YE315) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AMD16810.1	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)
	AMD16811.1	Membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. (210 aa)
	AMD17348.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)
	AMD17349.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
	AMD17350.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
	AMD17351.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (65 aa)
	AMD17352.1	Nucleotide pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)
	AMD17896.1	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (63 aa)
	coaD	Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the eukaryotic CoaD family. (152 aa)
	queC	7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. (225 aa)
	AMD18229.1	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
	AMD18230.1	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
	AMD18231.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)
	AMD18232.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
	AMD18234.1	Inosine-5-monophosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
	AMD18235.1	CBS domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	queE	Radical SAM protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (232 aa)
	AMD18237.1	6-carboxy-5,6,7,8-tetrahydropterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
	AMD18238.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)

Your Current Organism:

Methanobrevibacter sp. YE315

NCBI taxonomy Id: 1609968
Other names: M. sp. YE315

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMD16810.1	AMD16811.1	TL18_01380	TL18_01385	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.	0.550
AMD16811.1	AMD16810.1	TL18_01385	TL18_01380	Membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
AMD16811.1	AMD18237.1	TL18_01385	TL18_09525	Membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.	6-carboxy-5,6,7,8-tetrahydropterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.443
AMD16811.1	queC	TL18_01385	TL18_08870	Membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.	7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.	0.499
AMD17348.1	AMD17349.1	TL18_04525	TL18_04530	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
AMD17348.1	AMD17350.1	TL18_04525	TL18_04535	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.577
AMD17349.1	AMD17348.1	TL18_04530	TL18_04525	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
AMD17349.1	AMD17350.1	TL18_04530	TL18_04535	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.636
AMD17349.1	AMD17351.1	TL18_04530	TL18_04540	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.427
AMD17349.1	AMD18237.1	TL18_04530	TL18_09525	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	6-carboxy-5,6,7,8-tetrahydropterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.845
AMD17349.1	queC	TL18_04530	TL18_08870	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.	0.690
AMD17350.1	AMD17348.1	TL18_04535	TL18_04525	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.577
AMD17350.1	AMD17349.1	TL18_04535	TL18_04530	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.636
AMD17350.1	AMD17351.1	TL18_04535	TL18_04540	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.507
AMD17351.1	AMD17349.1	TL18_04540	TL18_04530	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.427
AMD17351.1	AMD17350.1	TL18_04540	TL18_04535	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.507
AMD17896.1	coaD	TL18_07575	TL18_07580	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the eukaryotic CoaD family.	0.564
AMD18229.1	AMD18230.1	TL18_09485	TL18_09490	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AMD18229.1	AMD18231.1	TL18_09485	TL18_09495	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
AMD18229.1	AMD18232.1	TL18_09485	TL18_09500	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.588