11 items (Methanobrevibacter sp. YE315) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	coaD	Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the eukaryotic CoaD family. (152 aa)
	queC	7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. (225 aa)
	AMD18229.1	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
	AMD18230.1	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
	AMD18231.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)
	AMD18232.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
	AMD18234.1	Inosine-5-monophosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
	AMD18235.1	CBS domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	queE	Radical SAM protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (232 aa)
	AMD18237.1	6-carboxy-5,6,7,8-tetrahydropterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
	AMD18238.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)

Your Current Organism:

Methanobrevibacter sp. YE315

NCBI taxonomy Id: 1609968
Other names: M. sp. YE315

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMD18229.1	AMD18230.1	TL18_09485	TL18_09490	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AMD18229.1	AMD18231.1	TL18_09485	TL18_09495	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
AMD18229.1	AMD18232.1	TL18_09485	TL18_09500	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.588
AMD18229.1	AMD18234.1	TL18_09485	TL18_09510	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Inosine-5-monophosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.426
AMD18229.1	AMD18235.1	TL18_09485	TL18_09515	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	CBS domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.402
AMD18229.1	coaD	TL18_09485	TL18_07580	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the eukaryotic CoaD family.	0.907
AMD18230.1	AMD18229.1	TL18_09490	TL18_09485	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AMD18230.1	AMD18231.1	TL18_09490	TL18_09495	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.707
AMD18230.1	AMD18232.1	TL18_09490	TL18_09500	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
AMD18230.1	AMD18234.1	TL18_09490	TL18_09510	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Inosine-5-monophosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.457
AMD18230.1	AMD18235.1	TL18_09490	TL18_09515	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	CBS domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.430
AMD18230.1	coaD	TL18_09490	TL18_07580	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the eukaryotic CoaD family.	0.907
AMD18230.1	queE	TL18_09490	TL18_09520	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Radical SAM protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.	0.419
AMD18231.1	AMD18229.1	TL18_09495	TL18_09485	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
AMD18231.1	AMD18230.1	TL18_09495	TL18_09490	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.707
AMD18231.1	AMD18232.1	TL18_09495	TL18_09500	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.889
AMD18231.1	AMD18234.1	TL18_09495	TL18_09510	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Inosine-5-monophosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.479
AMD18231.1	AMD18235.1	TL18_09495	TL18_09515	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CBS domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.446
AMD18232.1	AMD18229.1	TL18_09500	TL18_09485	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.588
AMD18232.1	AMD18230.1	TL18_09500	TL18_09490	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphopantothenoylcysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642