Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMD17251.1 | AMD18306.1 | TL18_03965 | TL18_09965 | ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Indole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |
| AMD17251.1 | hisA | TL18_03965 | TL18_08095 | ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.897 |
| AMD17251.1 | hisB | TL18_03965 | TL18_10285 | ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Imidazoleglycerol-phosphate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.915 |
| AMD17251.1 | hisC | TL18_03965 | TL18_01360 | ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidinol-phosphate aminotransferase; Catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.880 |
| AMD17251.1 | hisD | TL18_03965 | TL18_10500 | ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.921 |
| AMD17251.1 | hisE | TL18_03965 | TL18_09745 | ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | phosphoribosyl-ATP pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.936 |
| AMD17251.1 | hisF | TL18_03965 | TL18_00665 | ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.913 |
| AMD17251.1 | hisH | TL18_03965 | TL18_10055 | ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | 0.913 |
| AMD17251.1 | hisI | TL18_03965 | TL18_10195 | ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.911 |
| AMD18302.1 | AMD18306.1 | TL18_09945 | TL18_09965 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Indole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
| AMD18302.1 | AMD18308.1 | TL18_09945 | TL18_09975 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Anthranilate synthase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
| AMD18302.1 | AMD18309.1 | TL18_09945 | TL18_09980 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Anthranilate synthase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
| AMD18302.1 | trpA | TL18_09945 | TL18_09950 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.561 |
| AMD18302.1 | trpB-2 | TL18_09945 | TL18_09955 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Phosphoribosylanthranilate isomerase; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.561 |
| AMD18302.1 | trpD | TL18_09945 | TL18_09970 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.561 |
| AMD18302.1 | trpF | TL18_09945 | TL18_09960 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpF family. | 0.561 |
| AMD18306.1 | AMD17251.1 | TL18_09965 | TL18_03965 | Indole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |
| AMD18306.1 | AMD18302.1 | TL18_09965 | TL18_09945 | Indole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.561 |
| AMD18306.1 | AMD18308.1 | TL18_09965 | TL18_09975 | Indole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anthranilate synthase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMD18306.1 | AMD18309.1 | TL18_09965 | TL18_09980 | Indole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anthranilate synthase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
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